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Antimicrobial Agents and Chemotherapy, November 1998, p. 2889-2892, Vol. 42, No. 11
0066-4804/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Diversity of Structures Carrying the High-Level
Gentamicin Resistance Gene (aac6-aph2) in Enterococcus
faecalis Strains Isolated in France
Anne
Casetta,1,*
Annie Buu
Hoï,2
Gilda
de Cespédès,1 and
Thea
Horaud1
Laboratoire des Staphylocoques et des
Streptocoques, Institut Pasteur,1 and
Laboratoire de Microbiologie, Hôpital
Broussais,2 Paris, France
Received 13 April 1998/Returned for modification 14 July
1998/Accepted 1 September 1998
 |
ABSTRACT |
Of 24 high-level gentamicin-resistant clinical isolates of
Enterococcus faecalis, 20 carried gentamicin resistance
(Gmr) plasmids. The plasmids ranged from 65.0 to 80.0 kb in
size. Three of these plasmids were nonconjugative, and 17 transferred by conjugation to an E. faecalis recipient at low frequency
(10
5 to 10
6 transconjugants per donor). The
remaining four strains had a nonconjugative chromosomal Gmr
determinant. On the basis of restriction enzyme and DNA-DNA
hybridization profiles, Tn4001-like
elements were
located on the chromosome and three types of
Tn4001-truncated structures, I, II, and III, were found to
be carried by the Gmr plasmids. Structure I lacked
IS256 in the right-hand flanking extremity of
Tn4001. Structure II was the same as structure I except
that it also had a partial deletion of IS256 in the
left-hand flanking extremity of Tn4001. Structure III
lacked both the right- and left-hand flanking extremities of
Tn4001. One of the wild-type strains carried the
Gmr determinant both on the chromosome, as a
Tn4001-like
element, and on a conjugative plasmid, as a
Tn4001-truncated type I structure.
 |
INTRODUCTION |
Enterococcus faecalis is
increasingly implicated as an important cause of nosocomial infections,
particularly in surgical intensive care units (17, 21). The
natural tolerance of E. faecalis strains for antibiotics
that interfere with cell wall synthesis has led to the current use of
synergistic and bactericidal combinations of a beta-lactam or a
glycopeptide with an aminoglycoside, usually gentamicin
(16). The emergence and spread of E. faecalis strains with multiple antibiotic resistance, including resistance to
penicillins, glycopeptides, and high levels of aminoglycosides, have
greatly reduced the efficacy of such combinations. For this reason,
nosocomial and severe E. faecalis infections continue to be
a major medical problem (20).
The bifunctional enzyme, 6'-acetyltransferase-2"-phosphotransferase,
which mediates high-level gentamicin resistance (Gmr) in
enterococci and streptococci is encoded by the fused
aac6-aph2 gene (6). This gene is plasmid borne in
most gentamicin-resistant strains of E. faecalis (11,
18, 22) and other enterococcal strains studied so far (23,
25) and has been reported to be situated, on these plasmids, on
elements similar to the
or
forms of Tn4001,
originally identified in Staphylococcus aureus (15). The
element is a form of Tn4001 that
contains a tandem duplication of IS256, whereas the
form
does not. The Gmr determinant is carried on plasmids by
Tn4001-like elements in strains of E. faecalis
(7, 8, 22) and Enterococcus avium (23). There are other plasmid-borne structures, including
the Tn4001-truncated elements in E. faecalis
(22), Enterococcus hirae (23), and
Enterococcus raffinosus (23), and, in E. faecalis (8), the hybrid element
Tn4001-IS257, originally found in S. aureus (2). The Gmr determinant has been
found to be carried on the chromosome in two E. faecalis
(19, 24), one group B Streptococcus (strain B128)
(1), and several Streptococcus mitis
(13) clinical isolates. The chromosomal transposons so far
reported that carry the Gmr determinant are
Tn3706 (5.8 kb), the Tn4001-like
element in B128 (10), and, in E. faecalis, Tn5384
(26.0 kb), which consists in part of a Tn4001-like
structure (19), and Tn924 (27.0 kb), a novel type
of transposable element (24).
The purpose of the present report was to provide information on the
genetic and molecular basis of high-level gentamicin resistance in
E. faecalis strains isolated in France. Twenty-four E. faecalis clinical isolates were examined with respect to the
conjugative transfer, location, and structure of the genetic elements
carrying the Gmr determinant.
 |
MATERIALS AND METHODS |
The 24 independent wild-type E. faecalis clinical
strains used in this study (see Table 1) were isolated from the blood
and urine of patients with septicemia, endocarditis, or genital and urinary tract infections. In addition to being resistant to high levels
of gentamicin-kanamycin (MIC >2,000 µg/ml), most of them were also
resistant to chloramphenicol, erythromycin, and
tetracycline-minocycline. In mating experiments, carried out on
membrane filters (9), the wild-type strains, used as donors,
were crossed with E. faecalis recipient strain JH2-2
(12), which is resistant to rifampin and fusidic acid, and
the resulted transconjugant clones were crossed with E. faecalis recipient strain BM133 (11), which is
resistant to high levels of streptomycin. The antibiotics used were
1,000 µg of gentamicin per ml for the selection of transconjugants and 25 µg of fusidic acid per ml plus 100 µg of rifampin per ml or
2,000 µg of streptomycin per ml for the counterselection of the donors.
Isolation of cellular and plasmid DNA from E. faecalis
strains, digestion by restriction enzymes (EcoRI,
HaeIII, HincII, HindIII, and
ScaI), gel electrophoresis, DNA blotting, DNA-DNA
hybridization (under stringent conditions), and labeling of the probes
with [
-32P]dCTP were carried out as previously
described (14). The probes used for hybridization were
pSF815A, containing the aac6-aph2 gene (Gmr
probe) (6); pIP1551, containing a 468-bp DNA fragment of
IS256 which is a part of Tn4001 (IS256
probe) (see Fig. 1) (4); and pIP1644, containing a 629-bp
DNA internal fragment of IS257 (IS257 probe)
(5).
Macrorestriction analysis of the SmaI-digested cellular DNA
of the wild-type strains and pulsed-field gel electrophoresis were done
as we described recently (22).
 |
RESULTS |
Conjugative transfer of the Gmr marker and plasmid
isolation.
Each of the 24 wild-type E. faecalis strains
was mated with JH2-2. The results are presented in Table
1. The Gmr determinant
transferred by conjugation from the nine
-hemolytic wild-type
strains (1 to 4, 13 to 16, and 23) at high frequency (1 × 10
1 to 2 × 10
3 transconjugants per
donor cell), and in each cross, cell aggregates were observed on the
mating filters (9). The frequency of transfer of the
Gmr marker was low (1 × 10
5 to 3 × 10
6) for 8 (6 to 9 and 19 to 22) of the 15 nonhemolytic wild-type strains; no detectable transconjugants were
obtained (transfer frequency <10
9) for the remaining
seven strains (5, 10 to 12, 17, 18, and 24). Analysis of the
transconjugants for the presence of unselected antibiotic resistance
markers showed that the clones obtained by using as donors the
wild-type strains 7 to 9, 13, and 19 to 22 were resistant to only
gentamicin-kanamycin. Each of these clones carried a single plasmid,
estimated to be 65.0 to 80.0 kb, after digestion with
HindIII. The transconjugants that were resistant to
gentamicin-kanamycin and also to chloramphenicol, erythromycin, or both
carried at least two large plasmids. None of the transconjugant clones
carried the tetracycline-minocycline marker. The Gmr
plasmids retransferred into BM133 from the nonhemolytic
transconjugants, whether obtained from
-hemolytic or from
nonhemolytic wild-type strains, at low frequencies (10
5
to 10
6) and without the formation of cell aggregates on
mating filters.
Location of the aac6-aph2 gene and of IS256
and mapping of the structures carrying the Gmr
determinant.
Plasmid and cellular DNA isolated from all the
wild-type strains was digested with the restriction enzymes used to
characterize Tn4001-like structures: HaeIII,
HincII, HindIII, ScaI, and
ScaI plus HindIII (double digestion). The
digested DNA was subjected to gel electrophoresis and to DNA-DNA
hybridization experiments using the gene aac6-aph2 as well
as IS256 and IS257 as probes.
The results obtained by DNA-DNA hybridization are presented in Table
2. On the Gmr plasmids in
strains 1 to 5, 7 to 10, 13, and 18 to 22, the aac6-aph2 gene was located on HindIII fragments of 4.5 to 10.0 kb
and sequences homologous to IS256 were found on
HindIII fragments of 2.5 to 8.3 kb. On the
Gmr plasmids in strains 6, 14 to 16, and 23, the
aac6-aph2 gene was located on HindIII
fragments of 11.0 kb. In these strains, no hybridization with the
IS256 probe was detected. In strains 11, 12, 17, and 24, the
aac6-aph2 gene was located on chromosomal HindIII fragments of 2.5 kb and the IS256
probe was located on chromosomal HindIII fragments of
4.0 to 11.0 kb; no homology with the two probes was detected on any of
the plasmids carried by the wild-type strains 11, 12, 17, and 24. No
sequences homologous to IS257 were found on any plasmid or
cellular DNA.
Using the hybridization profiles obtained with
HaeIII,
HincII,
HindIII,
ScaI, and
ScaI-
HindIII digestions, we mapped the
structures
that carried the Gm
r determinant in each
wild-type strain. We detected (Table
2 and
Fig.
1) three Tn
4001-truncated
structures, designated I, II, and
III, as well as the previously
described Tn
4001 
element (
15).
Tn
4001-truncated type I elements (Fig.
1A) were found on the
plasmids
from strains 1 to 5, 7 to 10, and 13; these were characterized
by the absence of IS
256 in the right-hand flanking region of
the
element. In the 10 wild-type strains carrying this type of
structure,
three macrorestriction patterns were detected by
pulsed-field
gel electrophoresis of
SmaI-digested cellular
DNA. Each pattern
differed from the others by at least four bands (data
not shown).
Tn
4001-truncated type II elements (Fig.
1B) were
detected on the
plasmids from strains 18 to 22; these elements also
lacked IS
256 in the right-hand flanking region but differed
from the Tn
4001-truncated
type I structures in that there
was a partial deletion of IS
256 in the left-hand flanking
region of the element. The macrorestriction
patterns of the
SmaI-digested genomic DNA of strains 18 to 22
were similar,
if not identical (data not shown). In fact, these
strains had been
isolated in the same hospital in the same year
(Table
1) and are
probably epidemiologically related. The Tn
4001-truncated
type III elements (Fig.
1C) found on the plasmids from strains
6, 14 to
16, and 23 lacked IS
256 in both the right- and the left-hand
flanking regions of the element. This result suggests that the
insertion sequences originally flanking the gene
aac6-aph2
may
have been lost, may differ from IS
256 and
IS
257, or may never
have been present. The
SmaI
profile of strain 6 differed from
that of strains 14 to 16 and 23 by at
least four bands, whereas
the macrorestriction patterns of strains 14, 15, 16, and 23 differed
from each other by only one or two bands (data
not shown). Tn
4001-like

elements (Fig.
1D), found in the
cellular DNA of wild-type strains
11 to 13, 17, and 24, were identified
by their hybridization with
the gene
aac6-aph2 and with
IS
256 on fragments that were equivalent
in size to those of
the corresponding fragments of Tn
4001 (
15).
The
macrorestriction patterns of the
SmaI-digested
cellular DNA
of strains 12, 13, 17, and 24 differed from each other by
one
to three bands and from that of strain 11 by at least six bands
(data not shown).

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|
FIG. 1.
Restriction maps of the structures carrying the
Gmr marker. (A) Tn4001-truncated type I element
carried by the plasmids from strains 1 to 5, 7 to 10, and 13; lack of
IS256 in the right-hand flanking region of
Tn4001. (B) Tn4001-truncated type II element
carried by the plasmids from strains 18 to 22; lack of IS256
in the right-hand flanking region of Tn4001 and a partial
deletion of IS256 in its left-hand flanking region. (C)
Tn4001-truncated type III element, carried by the plasmids
from strains 6, 14 to 16, and 23; lack of IS256 in both
right- and left-hand flanking regions of Tn4001. (D)
Tn4001-like element borne on the chromosome of strains
11 to 13, 17, and 24. The open horizontal arrows indicate the direction
of transcription of the gene aac6-aph2 and of
IS256. Restriction endonuclease abbreviations: Ha,
HaeIII; Hc, HincII; Hd, HindIII;
Sc, ScaI. The location of the probe IS256 is
indicated by a thick black line.
|
|
The use of
EcoRI to cleave the cellular and plasmid DNA
revealed that only one copy of the element was found in all wild-type
strains, except strain 13, in which two copies were detected.
In fact,
the Gm
r determinant of strain 13 is located on both the
conjugative plasmid
pIP1734, as a Tn
4001-truncated type I
element, and the chromosome
of the wild-type host, as a
Tn
4001-like
element.
 |
DISCUSSION |
The results presented here suggest that the conjugative transfer
frequency of the Gmr plasmids carried by the
-hemolytic
wild-type or transconjugant E. faecalis strains may have
been high because these plasmids cotransferred along with the
-hemolysin plasmids carried by these strains. In fact, the
Gmr plasmids studied here, when they occur in nonhemolytic
strains, either are nonconjugative or transfer at low frequency;
apparently, the conjugative transfer of these plasmids is not mediated
by bacterial sex pheromones (3).
Structures that carry the aac6-aph2 gene in E. faecalis and other enterococcal strains are highly diverse
(8, 19, 22-24). The Gmr plasmids from E. faecalis strains isolated in France (this study) carry either
Tn4001-truncated type I elements, as reported for several
Gmr plasmids harbored by E. faecalis strains
isolated in Romania (22) and for pIP1701 from an E. raffinosus strain isolated in Portugal (23), or
Tn4001-truncated type II and III structures which, to our
knowledge, have not yet been described. In addition to the truncated
structures I, II, and III, pICC8, the Gmr plasmid from an
E. hirae strain isolated in Romania (23), carries an element characterized by the lack of IS256 in the
left-hand flanking region of the aac6-aph2 gene, designated
now as a Tn4001-truncated type IV structure.
The Tn4001-truncated elements were detected in this study
only on the Gmr plasmids (20 strains). By contrast, the
Tn4001-like
element has been found to be carried only on
the chromosome (four strains). The chromosomal location of this
transposon may serve to stabilize it while the location on a plasmid
may contribute to its instability, as a great variety of truncated
forms of Tn4001 were found on the plasmids examined here.
Certain regions of the Tn4001 transposon may have undergone
natural molecular rearrangements, generating the truncated structures
that we observed. As we examined the DNA of the wild-type strains,
these rearrangements did not occur in the course of mating experiments,
although they may have occurred during in vivo conjugative transfer
prior to the isolation of the wild-type strains.
Except for the Tn4001-truncated type II structure, the other
three types of elements, detected in the present study (Table 2 and
Fig. 1), have been found in both epidemiologically related and
unrelated strains. The spread of high-level gentamicin resistance in
E. faecalis isolates in France could be due to the
dissemination of such elements in unrelated strains as well as to the
spread of endemic and epidemic gentamicin-resistant strains. However, for about 15 years the incidence of high-level gentamicin resistance has been stable (<10%) in France. It is possible that the genetic instability of the structures carrying the Gmr determinant
on plasmids in E. faecalis, associated with a decreased selective pressure, may act as a natural regulation mechanism to
maintain the incidence of gentamicin resistance in France at a low but
stable level.
 |
ACKNOWLEDGMENTS |
We thank Karen Pepper and Névine El Solh for criticism of
the manuscript. We are grateful to N. El Solh for giving us strains harboring pIP1551 and pIP1644 and to J. J. Ferretti for the strain bearing pSF815A.
 |
FOOTNOTES |
*
Corresponding author. Present address: Laboratoire de
Microbiologie, Hôpital Porte Madeleine, B.P. 2439, 45032 Orleans
Cedex 1, France. Phone: 33 2 38 74 42 53. Fax: 33 2 38 74 47 91.
 |
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Antimicrobial Agents and Chemotherapy, November 1998, p. 2889-2892, Vol. 42, No. 11
0066-4804/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
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