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Antimicrobial Agents and Chemotherapy, July 1998, p. 1689-1694, Vol. 42, No. 7
0066-4804/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Gene Amplification in Leishmania
tarentolae Selected for Resistance to Sodium
Stibogluconate
Anass
Haimeur and
Marc
Ouellette*
Centre de Recherche en Infectiologie du CHUL
and Département de Biologie Médicale, Division de
Microbiologie, Université Laval, Québec, Canada
Received 17 February 1998/Returned for modification 17 March
1998/Accepted 5 May 1998
 |
ABSTRACT |
Leishmania tarentolae promastigotes were selected step
by step for resistance to sodium stibogluconate (Pentostam). Mutants resistant to antimony-containing drugs and cross-resistant to arsenite
were therefore obtained. Amplification of one common locus was observed
in several independent sodium stibogluconate-resistant mutants, and the
locus amplified was novel. The copy number of the amplified locus was
related to the level of resistance to pentavalent antimony. The gene
responsible for antimony resistance was isolated by transfection and
was shown to correspond to an open reading frame coding for 770 amino
acids. The putative gene product did not exhibit significant homology
with sequences present in data banks, and the putative role of this
protein in antimony resistance is discussed.
 |
INTRODUCTION |
The protozoan parasite
Leishmania sp. is transmitted to humans by the sandfly.
This parasite is found as a motile promastigote in the sandfly, and it
transforms into an amastigote when engulfed by host macrophages.
Leishmania is the causative agent of a group of diseases
known as leishmaniasis. Chemotherapy is the only effective way to
control infections, and the pentavalent antimony-carbohydrate complexes
sodium stibogluconate (Pentostam) and meglumine antimoniate (Glucantime) are the mainstays against all forms of
Leishmania infections (22). Although
unresponsiveness to antimonial drugs has not always been attributed to
drug resistance of the parasite, resistant parasites from patients who
did not respond to therapy have been isolated (13, 16, 19, 20,
36).
Pentavalent antimony [Sb(V)] is likely to be a prodrug that is
converted to a more toxic trivalent species (33). Although antimonial drugs have been used since approximately 1945, data on their
chemical structures and biochemical targets are limited. Interaction of
antimony with key sulfhydryl groups may be a major mechanism of action
and/or toxicity. As pentavalent antimony drugs bind to several
Leishmania proteins (1), it is indeed
possible that Sb(V) has several targets. The available evidence
does not exclude, however, binding to one main target (3).
The systematic analysis of drug-resistant mutants should be useful in
trying to delineate the drug target(s).
In order to try to understand metal metabolism and
resistance mechanisms in Leishmania, we have selected
several Leishmania species for resistance to sodium
stibogluconate, to trivalent antimony, and to the related metal
arsenite (28). The availability of arsenite (but not
antimony) in a radioactive form has led to a more thorough analysis of
arsenite-resistant mutants. The analysis of the arsenite-resistant
mutant has revealed the importance of transport systems recognizing
metals conjugated to glutathione or trypanothione (reviewed in
reference 27). Mutants selected for resistance to
arsenite were cross-resistant to antimony-containing drugs, and mutants
selected for resistance to Sb(III) or Sb(V) were cross-resistant to
arsenite (10). Mutants selected for antimony resistance
exhibited an active efflux of arsenite (10), and sodium
stibogluconate conjugated to glutathione was shown to compete the
transport of arsenite-thiol conjugates in transport studies of everted
membrane vesicles (9). There are, therefore, several
similarities between arsenite and antimony resistance mechanisms
in Leishmania. Nevertheless, some differences were apparent, such as amplification of the ABC transporter gene
pgpA in arsenite-resistant L. tarentolae mutants
but not in antimony-resistant mutants (10, 28). The
characterization of L. tarentolae Sb(V)-resistant mutants
has indicated the presence of a novel amplicon which was not observed
in our arsenite-resistant mutants. This report deals with the analysis
of the role of this novel amplicon in metal resistance.
 |
MATERIALS AND METHODS |
Cell lines and cultures.
The parental cell line L. tarentolae (TarIIWT) has been described previously
(39). SbV200.1 to SbV200.10 are sodium
stibogluconate-resistant mutants generated from the TarIIWT cell line
in a step-by-step selection procedure involving sodium stibogluconate
concentrations from 0.17 to 12 mM. SbV200.4rev is a revertant obtained
by growing the mutant SbV200.4 in SDM-79 medium without sodium
stibogluconate for several passages. Cells were grown in SDM-79 medium
supplemented with 10% fetal bovine serum at 29°C. Growth curves of
control strains and transfectants in the presence of drugs were
obtained as described previously (23), with absorbance
measured at 600 nm by using an automated microplate reader (Organon
Teknica Microwell System [Reader 510]). Statistical analysis was
performed by using Stat-View SE + Graphics 1988 (Abacus Concepts
Inc., Berkeley, Calif.). Statistical analysis of the difference between
groups was performed by analysis of variance using a least-squares
method. A P value of <0.05 was considered significant, and
a group comparison was performed by using Fisher's protected
least-significant difference test.
DNA work.
Gel electrophoresis, chromosome separation using
transverse alternating field electrophoresis (TAFE), and Southern
blotting were done as described previously (18). Isolation
of plasmid DNAs from Leishmania was done as described in
detail elsewhere (24). DNA sequencing was performed on an
Applied Biosystems 373 DNA automated sequencer. Sequence analysis was
performed by using the Genetics Computer Group software package (1994 release). Nucleotide sequence data reported in this paper are available in the EMBL GenBank and DDJB databases under accession no. AF047351. L. tarentolae promastigotes were transfected by
electroporation as reported previously (32). Selection was
done with 40 µg of G418 (GIBCO/BRL) ml
1 or with 100 µg of hygromycin (Calbiochem) ml
1.
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RESULTS |
Selection for sodium stibogluconate-resistant L. tarentolae mutants.
Resistance to Sb(V) has been induced in
several Leishmania species in a step-by-step manner
(10, 12, 14, 15, 37). Although Sb(V) is active against both
stages in the life cycle of the parasite (33),
Leishmania amastigotes are more sensitive to Sb(V) drugs
(5, 19, 33). Sodium stibogluconate contains the
preservative chlorocresol, and this compound seems to account for some
of the activity of sodium stibogluconate against Leishmania promastigotes (12, 34). In this study, 10 L. tarentolae clones were selected in a step-by-step fashion for
increased resistance to Sb(V) in the form of sodium stibogluconate. The
growth of TarIIWT cells was inhibited by 50% at an Sb(V) concentration
of 0.17 mM. The mutants were 70-fold more resistant than wild-type
cells to the action of Sb(V) (Table 1 and
data not shown). Mutants selected for resistance to sodium
stibogluconate may be cross-resistant to chlorocresol (12,
34). However, none of our mutants were cross-resistant to
chlorocresol (Table 1; data not shown). The mutants selected for sodium
stibogluconate resistance were also cross-resistant to meglumine
antimoniate, to antimony tartrate [Sb(III)], and to arsenite but not
to cadmium (Table 1). Preservatives were absent in the latter drugs,
showing that L. tarentolae mutants studied here were indeed
resistant to related metals.
Gene amplification in Sb(V)-resistant mutants.
Gene
amplification is a frequent mechanism by which Leishmania
resists the action of cytotoxic drugs (2, 3), and several amplicons have been observed in arsenite-resistant mutants (8, 18,
21, 25, 35). The detection of amplicons in Leishmania is facilitated by the low complexity of its genome, and this can usually be achieved by comparing digested DNA run on agarose gel stained by ethidium bromide (6, 24). Comparison of DNA
derived from a wild-type cell and TarIISbV200.4 digested with
BglII revealed an amplified band of 6.5 kb in the mutant
that was absent in the wild-type cell (Fig.
1). This amplified band was cloned and
used as a probe to look at amplification of this locus in other
mutants. Out of 10 mutants selected for Sb(V) resistance, 6 had the
same locus amplified (Fig. 2, lanes 3 and
4, and data not shown). In some mutants, like TarIISbV200.7 (Fig. 2,
lane 2), this locus was not amplified. Amplification of this novel
locus was also not observed in mutants selected for resistance to
arsenite or to trivalent antimony (Fig. 2, lanes 5 and 6). The
arsenite-resistant mutant TarIIAs20.3 contains two amplicons encoding
pgpA and the
-glutamylcysteine synthetase gene
gsh1, respectively (17), but the probe derived
from the amplicon present in TarIISbV200.4 did not recognize these two
amplicons (Fig. 2, lane 5), suggesting that the locus amplified in
several Sb(V)-resistant mutants is unrelated to the amplified regions
already characterized.

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FIG. 1.
Detection of gene amplification in TarSbV200.4. Ethidium
bromide-stained agarose gel containing molecular weight markers (lane
1), TarIIWT total DNA digested by BamHI (lane 2),
TarIISbV200.4 total DNA digested by BamHI (lane 3), TarIIWT
total DNA digested by BglII (lane 4), and TarIISbV200.4
total DNA digested by BglII (lane 5). The 6.5-kb amplified
band in lanes 3 and 5 is indicated by an arrow.
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FIG. 2.
Novel gene amplification in L. tarentolae
sodium stibogluconate resistant mutants. DNAs were digested with
BamHI, run on an agarose gel, blotted, and hybridized to the
amplified fragment isolated from TarIISbV200.4. Lanes: 1, TarIIWT; 2, TarIISbV200.7; 3, TarIISbV200.3; 4, TarIISbV200.4; 5, TarIIAs20.3; and
6, TarSbIII20.3.
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|
The novelty of this amplicon was further confirmed by hybridization of
a TAFE blot, on which Leishmania chromosomes were resolved. The novel locus amplified is derived from a large chromosome (Fig. 3,
lane 1), which differs from the pgpA (800 kb)- and
gsh1 (760 kb)-containing chromosomes. The locus was
amplified as part of extrachromosomal circles in mutants TarIISbV200.3
and TarIISbV200.4 (Fig. 3, lanes 2 and 3)
as indicated by their characteristic migration in TAFE gels, with the
long smears corresponding to various topoisomers (39). The
circular nature of the amplicons was further demonstrated by our
ability to isolate them by standard alkaline lysis procedures (24). The isolated circle was estimated to be more than 100 kb by its migration in agarose gel, but its digestion with
BglII (or BamHI) consistently yielded a prominent
6.5-kb fragment, suggesting that the amplicon is constituted mainly of
several tandem repeats of a short genomic region.

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FIG. 3.
Chromosome localization of the resistance gene present
on the novel amplicon. Leishmania chromosomes were
separated on 1% agarose gel by TAFE, blotted onto a nylon
membrane, and hybridized to the probe localized between the
BglII-XhoI restriction sites (see Fig. 5). Lanes:
1, TarIIWT; 2, TarSbV200.3; and 3, TarSbV200.4.
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|
Role of amplicon in resistance.
The mutant TarIISbV200.4 was
grown in the absence of Sb(V) for several passages, with the copy
number of the amplicon decreasing steadily (Fig.
4), and after 36 passages gene
amplification could not be detected by hybridization. Concomitant with
the loss of the amplicon there was a marked decrease in the resistance
level to Sb(V) (Fig. 4), hence circumstantially linking the amplicon to
resistance. Resistance did not, however, revert to wild-type levels
(Table 1), showing that a stable mutation, unrelated to the described
amplicon, also contributes to resistance. The role of this amplicon in
resistance was tested more directly by cloning the 6.5-kb
BamHI-BamHI fragment into the
Leishmania expression vector pSPYneo (31).
Transfection of this construct in Leishmania wild-type
cells, leading to TarII-
-Bam cells, was sufficient to confer
resistance to antimony-containing drugs and arsenite but not to cadmium
(Table 1). The increase in the 50% effective concentration
(EC50) was two- to threefold, depending on the metal (Table
1), and similarly, the 90% inhibitory concentrations were two- to
threefold higher in the transfectants than in the wild-type cells (not
shown). However, the construct could not yield the resistance levels
found in mutants, suggesting that this amplicon contributes to
resistance, but other (unstable) mutations are also present in the same
mutant and are lost during reversion.

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FIG. 4.
Reversion of drug resistance in TarIISbV200.4. The
mutant was grown in the absence of Sb(V) for up to 36 passages. The
copy number of the amplicon was measured by Southern blot analysis at
every four passages (inset) by using the probe localized between the
BglII-XhoI restriction sites (see Fig. 5). The
hybridization signal was normalized by hybridization to the unrelated
probe ptr1 (not shown). Resistance to sodium stibogluconate
was measured at selected passages. The bars represent
EC50s.
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|
Restriction mapping of the fragment was performed, but by
standard subcloning we did not succeed in reducing the size of the fragment involved in resistance (Fig. 5).
Nucleotide sequencing of the 6.5-kb DNA fragment (accession no.
AF047351) was undertaken. Sequence analysis revealed
several putative open reading frames encoding more than 200 amino acids, but none of these had significant similarities with
sequences present in data banks (data not shown). The longest open
reading frame encoded 770 amino acids (Fig.
6) and is called orfSbV in
this work. Sequence analysis has indicated that orfSbV is
located between two KpnI sites (Fig. 5). Subcloning of this
KpnI-KpnI fragment into a Leishmania
expression vector and its transfection to lead to TarII-
-Kpn led to
the same level of resistance as transfection of the whole 6.5-kb
fragment (Table 1), indicating that orfSbV is the gene
involved in metal resistance. The putative gene product of
orfSbV does not exhibit significant homology with any
sequence present in data banks, and its analysis did not convincingly
support the presence of putative transmembrane domains or of any other
structural features that may suggest how it confers resistance.

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FIG. 5.
Restriction map and subcloning of the amplified 6.5-kb
BamHI fragment. A restriction map was made and subclones
were transfected in Leishmania cells to delimit the
resistance gene. The KpnI sites were mapped after sequence
analysis. The presence (+) or absence ( ) of resistance to arsenite
(Asi) was determined. Abbreviations for restriction sites: B,
BamHI; G, BglII; K, KpnI; S,
SmaI; and X, XhoI.
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FIG. 6.
Nucleotide sequence of OrfSbV. The nucleotide sequence
of the KpnI-KpnI fragment is shown (restriction
sites are underlined). The amino acids corresponding to the open
reading frame are indicated in single-letter code. The sequence can be
found in the data bank under accession no. AF047351.
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|
 |
DISCUSSION |
Sb(V) is the drug of choice against Leishmania, and
resistance to it has fortunately been slow to arise. This is consistent with the hypothesis that several mutations are required for
the emergence of resistance (21). However, several
resistant strains have now been documented (13, 16, 19, 20,
36), and it is anticipated that resistance will increase further
(26), especially in L. donovani, for which humans
are a significant reservoir of the parasite. An increase in resistance
to Sb(V) may lead to therapeutic failure, and few alternatives are
available, hence the importance of understanding mechanisms of
resistance. Several investigators have selected Leishmania
mutants for studies of resistance to antimonial drugs (10, 12, 14,
15, 19, 37). Amplification of the ABC transporter gene
pgpA has been reported in one Sb(V) resistant mutant
(14). The role of PgpA in metal resistance has been studied
by gene transfection (4, 17, 30). Depending on the species
into which pgpA is transfected, resistance to Sb(V) could be
detected (21). Although pgpA amplification is
frequent in arsenite-resistant mutants (18), it was not
observed in our L. tarentolae Sb(V) mutant. Instead a novel
amplicon was characterized.
A novel resistance gene present on this amplicon was isolated by gene
transfection. The gene product of orfSbV does not show significant homology to other proteins in the data banks. This is not
unexpected, as ongoing genome projects are revealing that nearly 50%
of the parasite genes will not match homologs in other kingdoms
(7, 11, 38). Unfortunately, this lack of homology does not
provide insights on the mechanism of resistance. Efflux seems unlikely,
since no clear transmembrane domains are present in orfSbV, but we
cannot exclude the possibility that orfSbV associates with a membrane
protein. Binding of antimony by vicinal thiols (Fig. 6, amino acids 15 and 16) is also unlikely, as cross-resistance to cadmium would be
anticipated and neither the mutants nor the transfectants are cadmium
cross-resistant (Table 1). Clearly, further work is required to
establish the biochemical mechanism of resistance. Nevertheless,
amplification of orfSbV has been observed in several
independent mutants, suggesting that its gene product is part of an
important pathway leading to resistance. Transfection of
orfSbV does not yield the resistance levels found in
mutants, suggesting that several genes are involved in resistance. This
is consistent with the step-by-step selection procedure used to
generate the mutants. Our analysis of arsenite resistant mutants has
indeed indicated that several genes, some of which act in synergy, are
involved in resistance (27). It remains to be seen whether the orfSbV product, along with other gene products,
is capable of conferring resistance in an additive or synergistic fashion.
The lack of cross-resistance to cresol in L. tarentolae
mutants (Table 1) is also worth discussing. L. donovani and
L. mexicana promastigotes selected for Sb(V) resistance were
found to be cross-resistant to cresol, and part of the activity of
Sb(V) against Leishmania parasites was attributed to cresol
(34). It has been shown, however, that amastigotes are more
sensitive to Sb(V) than promastigotes, although the fold difference
varied from 5 to 200, depending on the species (5, 12, 33).
L. tarentolae is hypersensitive to metals, being
10- to 100-fold more sensitive than pathogenic species (21).
This differential susceptibility may be explained in part by a less
active endogenous efflux system in L. tarentolae (21). The natural host of L. tarentolae is
the lizard, and the parasites likely circulate mainly as promastigotes
in the bloodstream (40). This parasite has the capacity to
transform into an amastigote, but it is not capable of surviving
within mammalian macrophages (29, 40). Although highly
speculative, it is possible that L. tarentolae, due to its
life cycle, has acquired some amastigote-like characteristics. This may
explain its hypersensitivity to metals and why Sb(V)-selected mutants
are resistant to metal and not to cresol. Alternatively, the
concentration of cresol present in our Sb(V) preparation may be
detoxified more readily in L. tarentolae than in other
species. In summary, antimony-resistant Leishmania was
generated and a novel gene contributing to resistance was
isolated. Further work is required to understand the biochemical mechanism of this resistance.
 |
ACKNOWLEDGMENTS |
This work was supported in part by a group grant in Infectious
Diseases from the Medical Research Council to M.O. M.O. was a
Chercheur Boursier Junior II of the FRSQ, is now supported by an MRC
Scientist award, and is a recipient of a Burroughs Wellcome Fund New
Investigator Award in Molecular Parasitology.
We thank M. Grögl (Walter Reed) and J.-P. Papin
(Rhône-Poulenc Rorer) for the generous gift of sodium
stibogluconate and meglumine antimoniate, respectively. We thank B. Papadopoulou (CHUL) for critical reading of the manuscript.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Centre de
Recherche en Infectiologie, 2705, boul. Laurier, Sainte-Foy,
Québec G1V 4G2, Canada. Phone: (418) 654-2705. Fax: (418)
654-2715. E-mail: Marc.Ouellette{at}crchul.ulaval.ca.
 |
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