Antimicrobial Agents and Chemotherapy, October 1999, p. 2493-2496, Vol. 43, No. 10
0066-4804/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Department of Pathobiology, University of Washington, Seattle, Washington,1 and Division of Molecular Biology and Genetics, University of Utah, Salt Lake City, Utah2
Received 14 January 1999/Returned for modification 19 April 1999/Accepted 26 July 1999
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ABSTRACT |
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The role of mutations in the genes for GyrA and ParC in quinolone
resistance in Mycoplasma hominis was studied. Selection with sparfloxacin gave mutations at GyrA83 (Ser
Leu;
Escherichia coli numbering) or GyrA87 (Glu
Lys), and
mutants had increased levels of resistance to sparfloxacin (8- to
16-fold) but not to ofloxacin. Selection with ofloxacin gave changes at
ParC80 (Ser
Ile) or ParC84 (Glu
Lys), and mutants were four- to
eightfold more resistant to ofloxacin but not to sparfloxacin.
Selection of second-step mutants from strains with ParC mutations with
either quinolone yielded double mutants with additional mutations at
GyrA83 (Ser
Trp or Ser
Leu) or GyrA87 (Glu
Lys). Second-step
selection of GyrA mutants gave additional mutations at ParC80
(Ser
Ile) or ParC84 (Glu
Lys). Two-step mutants showed high levels
of resistance to ofloxacin (MICs, 64 to 128 µg/ml) and moderate
levels of resistance to sparfloxacin (MICs, 2 to 8 µg/ml). The
primary target of ofloxacin in first-step mutants of Mycoplasma
hominis was ParC, whereas that for sparfloxacin was GyrA.
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INTRODUCTION |
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Quinolones are synthetic antimicrobial agents which target topoisomerases II and IV in bacteria (4, 7-9, 11). Most mutations to quinolone resistance involve changes in gyrA and/or parC, although mutations are known in gyrB and parE. Mycoplasma hominis is an opportunistic pathogen commonly found in the male and female genital tracts. The organism is unusual: it has no cell wall, a small genome (700 kbp), a low guanine-plus-cytosine ratio (30%) in its DNA, and a high mutation rate (5). Its susceptibility to quinolones closely parallels that of Staphylococcus aureus (13). The purpose of the current study was to determine the rates of mutation to quinolone resistance in first- and second-step mutants of M. hominis and to determine the roles of GyrA and ParC in this resistance. Some of these data have been reported in a preliminary communication (14).
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MATERIALS AND METHODS |
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Mycoplasma hominis GX55, a strain from
Seattle, Wash., was grown in H broth (12) supplemented with
20% horse serum, 5 mM arginine, 10% fresh yeast extract, 0.001%
phenol red, and 200 U of penicillin per ml. The H-agar medium
(12) was similar: arginine was omitted and agarose was added
at 0.7%. For selection of mutants, H agar was supplemented with
various concentrations of a quinolone. Strain PG-21 was obtained from
the American Type Culture Collection (Bethesda, Md.) as strain 23114 (6). Actively growing cultures were disaggregated by
filtration through a 0.6-µm-pore-size polycarbonate filter
(Nuclepore; Corning, Acton, Mass.) and were inoculated (0.1 ml) onto
H-agar plates (10 ml in 60-mm-diameter plates) containing a quinolone
at 0, 1.0, 2.0, 4.0, and 8 times the MIC determined for unselected
organisms. The number of CFU was determined by plating serial 10-fold
dilutions on control agar. The frequency of occurrence of mutants
(mutant frequency) was the number of colonies found on selective media
divided by the number of CFU found on control plates. Mutant colonies
were excised with a plastic pipette, and the agar plugs were inoculated into quinolone-free broth medium. After growth for 24 h, broth cultures were stored at
70°C. Mutants were cloned on quinolone-free agar. The susceptibilities of the mutants were determined by the agar
dilution method (15).
Prototypical sequences of the proposed gyrA and parC regions of M. hominis were initially obtained by PCR with DNA from strain PG-21 (6) and degenerate primers in the N-terminal regions of the genes as described previously (10). The assignment of the M. hominis gyrA and parC gene fragments was based on their amino acid sequence homology with other well-characterized gyrA and parC sequences. M. hominis-specific primers were subsequently derived from these prototypical sequences. The primers selected for gyrA were 5'-GCACCGTAGAATTTTATATGG-3' and 5'-CATACCGACCGCTATTCCACT-3', which yielded a product of 361 bp, excluding the primers. The primers for parC were 5'-CGTCGGATTTTATATTCAATG-3' and 5'-GGTGATTCCTTTAGCACCGTT-3', which yielded a 348-bp fragment, excluding the primers. Mycoplasmal cultures (1.5 ml) were centrifuged, the pellet was solubilized with 10 µl of 0.25% deoxycholate in 10 mM Tris-HCl-1 mM EDTA at (pH 8.3), and 1 µl of proteinase K (200 µg/ml) was added. Two microliters of GyrA and 3 µl of ParC primers (at 5 pmol/ml) were combined with 3 µl of template in the reaction mixture (18). Amplification was carried out by heating the sample to 93°C for 4 min, followed by 35 cycles of amplification (30 s each at 93, 56, and 72°C) with a final synthesis of 5 min at 72°C. The PCR products were evaluated by electrophoresis in 2% SeaKem LE agarose (FMC Bioproducts, Rockland, Maine), followed by ethidium bromide staining (19). The PCR products were sequenced with the Big Dye Terminator Ready Reaction Kit on an ABI Prism 377XL DNA Sequencer (Perkin-Elmer, Foster City, Calif.) at the Biochemistry Department, University of Washington. The sequences in both directions were determined for most but not all mutants. Sequences were aligned by using the program Sequencher 3.1 (Gene Codes Corp., Ann Arbor, Mich.).
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RESULTS |
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Small mutant colonies of various sizes were observed on
plates containing ofloxacin at 1×, 2×, and 4× the MIC beginning on day 2. Colonies increased in size for several days, and additional colonies appeared day by day, whereas the sizes and numbers of colonies
on control plates with approximately 100 colonies were stable after day
2. Mutant colonies selected with sparfloxacin were smaller on day 3 and
took longer to reach the same diameter as those selected with
ofloxacin. However, subcultures of mutants grew as rapidly as the
parent strain in quinolone-free medium. The inoculum size averaged
2.8 × 107 CFU (range, 1 × 106 to
1.8 × 108 CFU) in the 0.1-ml sample applied to the
selection plates. The average mutant frequency was 1.5 × 10
6 (range, 1.4 × 10
5 to 1.6 × 10
7). The mutant frequency among first-step mutants was
the same by selection with either sparfloxacin or ofloxacin. The
average mutant frequency for second-step mutants was closely similar at 1.8 × 10
6 (range, 1.3 × 10
5 to
6.6 × 10
7). Independent cultures were prepared by
inoculating separate broth tubes with 101 to
104 mycoplasmas. Selection of five cultures (examples of
two cultures [cultures A and B] are shown in Table
1) independently derived with
sparfloxacin at 0.03 µg/ml (1× the MIC) or 0.125 µg/ml gave rise
to strains with 8- to 16-fold increased levels of resistance to
sparfloxacin (MICs, 0.25 to 0.5 µg/ml) but no increase in the level
of resistance to ofloxacin. A similar picture was seen when the same
independent cultures were selected with ofloxacin (cultures C and D,
Table 1). The MIC of ofloxacin increased four- to eightfold, whereas
the susceptibility to sparfloxacin was unchanged. Mutant colonies were
seen only on plates containing 1× to 4× the MIC of either
sparfloxacin or ofloxacin. The number of colonies diminished with an
increase in the quinolone concentration. No mutant colonies were
observed on plates containing 8× the MIC, even though the MICs for the
first-step mutants were two- to eightfold higher than that of the
selecting quinolone.
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The nucleotide sequence of the amplified portion of gyrA of
strain GX-55 was compared with that of gyrA of M. hominis PG-21. Strain GX-55 showed two nucleotide changes at amino
acid positions 158 (GTC
GTT; Escherichia coli numbering)
and 159 (TTG
TTA). Two nucleotide changes were observed in the
parC fragment: one at the hot spot for resistance mutations
at position 84 (GAA
GAG) and the other at position 133 (AAA
AGA).
None of these nucleotide changes affected the amino acid sequence. Our
results for PG-21 were the same as those of Bébéar et al.
(1-3).
First-step, sparfloxacin-selected mutants showed changes in GyrA (Table
1) at amino acid position 83 (Ser
Leu) or at position 87 (Glu
Lys).
First-step mutants selected with ofloxacin showed mutations in ParC: at
position 80 (Ser
Ile) or at position 84 (Glu
Lys). Selection of a
first-step mutant with a mutation at ParC80 (strain D), again with
ofloxacin, yielded two different step-two mutants: GyrA83 (Ser
Trp)
and GyrA83 (Ser
Leu) (mutants D1 and D2, Table 1). The MIC of
sparfloxacin increased 64- to 128-fold, from 0.015 to 4 or 8 µg/ml,
and that of ofloxacin increased 16- to 32-fold. Selection of the
single-step ParC84 mutant with sparfloxacin gave two-step mutants with
a mutation at GyrA87 (Glu
Lys), with similar large increases in
resistance to both quinolones (mutant C1). Selection of a first-step
mutant with a mutation at GyrA87 (mutant A) with sparfloxacin or
ofloxacin resulted in step-two mutants that had changes at ParC80
(Ser
Ile) or ParC84 (Glu
Lys). A second selection of the
mutant with a mutation at GyrA83 (mutant B) with sparfloxacin or
ofloxacin gave second-step mutants with substitutions at ParC80
(Ser
Ile). Overall, susceptibility to ofloxacin decreased 128-fold
and that to sparfloxacin decreased 4- to 8-fold compared to the
susceptibilities of strains with single mutations.
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DISCUSSION |
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A principal finding of the study was that the initial topoisomerase targets in M. hominis selected with sparfloxacin or ofloxacin differ: sparfloxacin selected for GyrA mutants and altered the gyrase target, whereas ofloxacin selected for ParC mutants and affected the topoisomerase IV target. Because mutations in parC did not increase the level of resistance to sparfloxacin, first-step parC mutants could be selected with ofloxacin but not with sparfloxacin. Similarly, first-step gyrA mutants were selectable only with sparfloxacin because they showed no increase in resistance to ofloxacin.
A comparison of our results for first- and second-step mutants with
those from the recent studies by Bébéar et al. (2, 3) shows the variety of mutations which can occur on selection of
M. hominis with ofloxacin and sparfloxacin. They recovered three single-step mutants: those with mutations at ParE426 (Asp
Asn), GyrA83 (Ser
Leu), and GyrA84 (Ser
Trp). Only one of these
overlapped with the four that we derived. Their two-step mutants, those
with mutations at GyrA83 (Ser
Leu), ParC84 (Glu
Lys), and GyrA83
(Ser
Leu)-GryA84 (Ser
Trp), differed from the four two-step mutants
that we found. Thus, six different single-step mutants and six distinct
two-step combinations are possible. Closely similar results have been
reported by Pan and Fisher (16) for selection of mutants of
Streptococcus pneumoniae with ciprofloxacin and
sparfloxacin. Sparfloxacin selected for first-step GyrA mutants and
ciprofloxacin selected for a first-step ParC mutant. First-step GyrA
mutants had increased levels of resistance to sparfloxacin but not to
ciprofloxacin. The ParC mutant had increased levels of resistance to
ciprofloxacin but not to sparfloxacin. Second-step mutants had
mutations in the other topoisomerase and greatly increased levels of
resistance to both quinolones.
One mutant (mutant D1) showed a GyrA83 (Ser
Trp) substitution as a
result of a TCA
TGA change. This mutation would be lethal to
conventional bacteria, but mycoplasmas decode TGA as tryptophan rather
than as a stop (5). Bébéar et al. (2)
found this mutation for both serines at GyrA83 and GyrA84. The two
tryptophans in the ParC fragment from the parent culture were encoded
by TGA at amino acid positions 50 and 93. The GyrA sequence amplified from the parent culture had no tryptophans.
Single mutations in either gyrase or topoisomerase IV gave modest
increases in the levels of resistance of M. hominis to the selecting quinolone, but high-level resistance was seen for strains that have mutations in both topoisomerases, as is true for bacteria in
general (4, 7, 8, 10, 20). Even though ofloxacin did not
select for first-step GyrA mutations, it readily selected for GyrA
mutations in strains with mutations already present in ParC (Table 1).
For one group of double mutants (GyrA83 [Ser
Leu] and ParC80
[Ser
Ile]; strains B1, B2, and D2, Table 1), sparfloxacin MICs were
8 µg/ml, which is fourfold greater than those for another group
of mutants with double mutations (GyrA87 [Glu
Lys] and ParC84 [Glu
Lys]; strains A2, A3, and C1).
The recognition of selective targeting of GyrA or ParC provides some
theoretical concepts for the development of strategies for the
treatment of infections caused by organisms for which selective
targeting similar to that observed with M. hominis is shown.
The use of ofloxacin would be disadvantageous for organisms for which
MICs are close to the levels known to be achievable in blood because a
single-step mutation could result in clinical resistance. In contrast,
two mutations would be required to achieve clinical resistance to
sparfloxacin, given its relatively greater activity. However, the use
of sparfloxacin for the treatment of infections caused by organisms
with ParC mutations (as a result of previous treatment with ofloxacin)
could likely fail because a single mutation could lead to clinical
resistance. Several strategies have been proposed: one is to find
quinolones which equally target gyrase and topoisomerase IV
(21). Recently, Pan and Fisher (17) have shown
dual targeting of S. pneumoniae gyrase and topoisomerase IV
by clinafloxacin. A related proposal would be to use both ofloxacin and
sparfloxacin simultaneously to control infections with M. hominis or organisms with similar susceptibilities. In both of these cases, the frequency of development of resistance is expected to
be much less because the organism needs to acquire mutations in
both the gyrase and topoisomerase IV targets simultaneously to develop
resistance. In the case of M. hominis, this could give a
mutant frequency of 10
12, whereas that for strains with
single-step mutations is 10
6. The result that first-step
mutations may well appear to be "silent" when tested with one
quinolone suggests that quinolone susceptibility testing needs to be
done with quinolones which prefer different targets, as has been
suggested by Bébéar et al. (3) for mycoplasmas. Since the patterns of resistance in M. hominis closely
parallel those in gram-positive bacteria (13), the high
M. hominis mutation rates make this organism a good model
for studies of quinolone resistance.
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ACKNOWLEDGMENTS |
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We thank Kenneth Bott and Timothy Rose for helpful advice.
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Pathobiology, Box 357238, University of Washington, Seattle, WA 98195. Phone: (206) 543-1036. Fax: (206) 543-3873. E-mail: kennyg{at}u.washington.edu.
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