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Antimicrobial Agents and Chemotherapy, December 1999, p. 2904-2909, Vol. 43, No. 12
Infectious Disease Research Section,
Wyeth-Ayerst Research, Pearl River, New York 10965
Received 1 June 1999/Returned for modification 12 August
1999/Accepted 21 September 1999
The biochemical properties of tetrahydrofuranyl (THF) carbapenems,
carbapenems with THF substituents, were evaluated with respect to
enzyme stability, binding to penicillin-binding proteins (PBPs), and
penetration into gram-negative organisms. THF carbapenems showed
increased stability to hog renal dehydropeptidases (DHPs) compared to
that of imipenem or meropenem and were more stable to human DHP than
imipenem (<10% hydrolysis compared to that for imipenem). THF
carbapenems were stable to hydrolysis by all serine Carbapenems, such as imipenem,
meropenem, and biapenem, have the broadest spectrum of antimicrobial
activity among the Tetrahydrofuranyl (THF) carbapenems, such as CL 191,121, CL 188,624, and CL 190,294, are a new class of carbapenems with THF substituents
(15-17). These carbapenems exhibit broad-spectrum antibacterial profiles that combines the good activities of meropenem and biapenem against gram-negative bacteria with the excellent activity
of imipenem against gram-positive bacteria (15, 31). A
series of peptidic THF carbapenem prodrugs such as CL 191,638 and
CL 191,983 are based on the parent compound CL 191,121 and exhibit
activity when they are administered orally (16, 32). They
are especially attractive because both imipenem and meropenem are
parenterally administered drugs. The present study outlines the
biochemical properties of THF carbapenems for their stabilities to the
hydrolytic activities of DHPs from the hog, mouse, rat, and human and
to bacterial serine and metallo Antibiotics.
Biapenem, piperacillin, THF carbapenems, and
their derivatives were synthesized by the Chemistry Group of
Wyeth-Ayerst Research. The structural characteristics of each THF
carbapenem are indicated in Fig. 1 and
Table 1 (also, see references
15 to 17). Imipenem was obtained
from Merck (Rahway, N.J.), meropenem was obtained from Zeneca
(Maccelesfield, England), cephaloridine was obtained from Sigma (St.
Louis, Mo.), and cefotaxime was obtained from Hoechst-Roussel
Pharmaceuticals Inc. (Frankfurt, Germany). Working solutions of
antimicrobial agents were freshly prepared on each day of assay.
0066-4804/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Biochemical Characterization of Novel
Tetrahydrofuranyl 1
-Methylcarbapenems: Stability to Hydrolysis
by Renal Dehydropeptidases and Bacterial
-Lactamases, Binding to
Penicillin Binding Proteins, and Permeability Properties
![]()
ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-lactamases
tested. CL 191,121, a prototype THF carbapenem, was more stable to
hydrolysis by carbapenem-hydrolyzing serine
-lactamases such as
IMI-1 and Sme-1 than imipenem, with a relative
kcat value of <20% for imipenem. Similar to
imipenem and meropenem, THF carbapenems were not stable to the metallo
-lactamases CcrA and L1. However, CL 191,121 bound to all
Staphylococcus aureus PBPs at concentrations that were less
than or equal to the MICs. The THF carbapenems bound to PBPs from
Escherichia coli and Pseudomonas aeruginosa, with the highest affinities being for PBPs 2 and 4, as noted with imipenem. The affinities for PBPs 1a and 1b in E. coli were
reduced for the THF carbapenems compared to that for imipenem, even
though the MICs of the THF carbapenems for E. coli strains
were lower than those of imipenem. The penetrability of the THF
carbapenems into Serratia marcescens S6, which produces the
Sme-1 carbapenem-hydrolyzing
-lactamase, was 2.4 to 7.8 times less
than that of imipenem. Compounds CL 190,294 and CL 188,624 showed good
penetrability, with permeability coefficient values comparable to those
of the rapidly penetrating agents cephaloridine, imipenem, meropenem, and biapenem. Decreased penetration into wild-type P. aeruginosa was suggested by the high MICs of the THF carbapenems
(MICs, 16 to 32 µg/ml), despite equivalent or better binding to
P. aeruginosa PBPs than that of imipenem. However, the MICs
of the THF carbapenems for wild-type P. aeruginosa compared
to that for an OprD2 mutant generally varied no more than 2-fold, but
those of imipenem and other carbapenems differed 16-fold. These data
indicated that THF carbapenems do not appear to enter through protein
OprD2. In conclusion, the THF carbapenems exhibited stability to
hydrolysis by renal DHPs and serine
-lactamases, exhibited strong
binding to essential PBPs from E. coli and S. aureus, and penetrated gram-negative enteric bacteria at rates
comparable to those for meropenem and biapenem.
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-lactams and exhibit fewer common resistance
problems (2, 20, 23). This activity is due to the combined
effects of good stability to hydrolysis by most
-lactamases, strong
binding to essential penicillin-binding proteins (PBPs), and good
penetrability into gram-negative organisms (8, 29, 30). The
excellent activity of imipenem against Pseudomonas
aeruginosa has also been attributed to entry into the organisms
via a specific carbapenem uptake pathway involving the OprD protein
channel (30). However, imipenem can easily be destroyed by
mammalian dehydropeptidases (DHPs) (13, 19) and must be
administered with the DHP inhibitor cilastatin (11). In
addition, imipenem has a relatively short half-life in vivo and is not
orally active. With a 1,
-methyl group attached to the
-lactam
nucleus, meropenem and biapenem showed significantly improved stability
to DHP hydrolysis (9, 35). However, none of these
carbapenems are orally active.
-lactamases. The PBP affinities for
THF carbapenems were compared with those for other carbapenems. The
penetration properties of THF carbapenems into gram-negative bacteria
have also been evaluated.
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References

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FIG. 1.
Structures of the aminomethyl THF 1-
-methyl
carbapenems. Stereochemistries were as follows (R and
S define the configuration of the chiral carbon atom): CL
191,121, 3R, 2R; CL 188,624, 3S,
5R and 3R, 5S; CL 190,294, 3R, 5R and 3S, 5S.
TABLE 1.
Stabilities of THF carbapenems to hydrolysis by renal
DHPs and
metallo
-lactamasesa
Microorganisms.
Serratia marcescens S6, a
carbapenem-hydrolyzing serine
-lactamase producer (33),
was used as the test organism for the penetration assays. P. aeruginosa 27853 was used to derive the OprD2-deficient mutants. A
standard P. aeruginosa OprD2-deficient isolate, isolate GC
1543, originated by Quinn et al. (24), was also used for
comparison. Staphylococcus aureus 29213, Escherichia coli MC4100, and P. aeruginosa 27853 were used as test
organisms for the PBP assays.
Enzymes. DHPs from fresh hog and mouse kidney and from rat intestine were extracted with butanol and were precipitated with ammonium sulfate in 10 mM HEPES (N-[2-hydroxyethyl]piperazine-N'-2 ethanesulfonic acid) buffer (pH 7.2) (7). The enzymes were solubilized from frozen precipitates on each day of assay. A human DHP gene was cloned from a human kidney cDNA gene bank and was expressed in human kidney 293 cells (25). DHP was partially purified as described previously (1).
Bacterial metallo
-lactamase CcrA from Bacterioids
fragilis was purified to homogeneity from the CcrA cloned in
E. coli DH5
(34). Metallo
-lactamase L1
from Stenotrophomonas maltophilia was purified by CM-C50
cation-exchange chromatography (4). The serine
-lactamases, P99 from Enterobacter cloacae, PC1 from S. aureus, TEM-2 from E. coli, TEM-26 from
Klebsiella pneumonia, and Sme-1 from S. marcescens, were purified to homogeneity by previously described
methods (35). The IMI-1
-lactamase from E. cloacae was purified to homogeneity by column chromatography (26).
Enzyme stability and kinetic studies.
Carbapenems were
prepared at a concentration of 1.0 mg/ml in water and were assayed at a
final concentration of 50 µg/ml. The relative hydrolysis rates for
carbapenems were determined spectrophotometrically at UV wavelengths of
290 to 300 nm on the basis of the maximum change in absorbance in the
difference spectrum following enzymatic hydrolysis by the CcrA enzyme.
The hydrolysis of carbapenems by the DHPs and metallo
-lactamases
was measured in 10 mM HEPES buffer (pH 7.2). Hydrolysis of carbapenems
by serine
-lactamases was determined in 50 mM phosphate buffer (pH
7.0). Two different volumes of enzyme (10 to 50 µl) were used in a
total volume of 1,000 µl, and rates were determined as nanomoles of substrate hydrolyzed per microliter of enzyme solution added. Imipenem
and meropenem were included as reference compounds for each set of
assays. Relative hydrolysis rates were calculated by normalizing the
specific molar hydrolysis rates to those observed with imipenem on the
same day. Kinetic parameters (Km and
Kcat) of the carbapenem-hydrolyzing enzymes were
derived with the ENZPACK (Biosoft) program on the basis of two
independent experiments with at least six concentrations of the
substrate at a single enzyme concentration. The maximum hydrolytic
activity was reported as a kcat value
(second
1) for each substrate. The total protein
concentration in each enzyme preparation was determined by a
bicinchoninic acid assay (Pierce Chemical Co., Rockford, Ill.).
Assay for PBP binding. PBP binding was assessed by competition assays based on the method of Spratt (28). In standard assays, carbapenems were incubated with solubilized membranes for 10 min at 30°C. [14C]benzylpenicillin was added to give a final concentration of 10 µg/ml. The membranes were incubated for another 10 min at 30°C, and the reaction was terminated with cold acetone. For mechanistic studies the timing and temperatures of the incubations were varied (3). PBPs were detected by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and fluorography. X-ray films were analyzed on a Shimadzu CS9000U densitometer, with the 50% inhibitory concentrations (IC50s) determined graphically.
Penetration studies.
The penetrabilities of the
-lactams
into gram-negative bacteria were determined by the method introduced by
Zimmermann and Rosselet (37) and modified by Nikaido et al.
(22). S. marcescens S6, the Sme-1
carbapenem-hydrolyzing serine
-lactamase producer, was used as the
test organism. Details of the permeability assay were described
previously (35). The antibiotic diffusion rate (VE) was
obtained with whole-cell suspensions. The hydrolysis rates were
determined with sonicated cells and were used to derive Km and Vmax values.
Permeability coefficients were calculated by the formula originated by
Nikaido et al. (22).
Derivation and identification of P. aeruginosa OprD2 mutants. P. aeruginosa 27853 was cultured (108 CFU) on a tryptic soy agar plate containing 4, 8, and 16 µg of imipenem per ml. Plates containing 4 and 8 µg of imipenem per ml were incubated at 37°C for 24 h, and plates containing 16 µg of imipenem per ml were incubated for 48 h. Resistant selection frequency was calculated on the basis of the growth of colonies on the imipenem-containing plates. The imipenem resistance of the isolated colonies was confirmed by disc diffusion testing and MIC assays. Outer membrane proteins of the parent and selected resistant isolates, as well as those of the control OprD2 deficient strain, were extracted with 1% laurylsarcosine and identified by SDS-PAGE with 12% polyacrylamide gels (27).
Microbiological assays. MICs were determined by the broth microdilution method in Mueller-Hinton II broth as recommended by the National Committee for Clinical Laboratory Standards (21).
| |
RESULTS |
|---|
|
|
|---|
Stabilities of THF carbapenems to DHPs.
The relative
hydrolysis rates of DHP and metallo
-lactamases for the THF
carbapenems, together with their structural characteristics, are
summarized in Table 1. For hog DHPs, all the THF carbapenems were
hydrolyzed at rates slower than those observed for imipenem and
meropenem. The stabilities of carbapenems to hydrolysis by mouse and
human DHPs indicated that all compounds tested were less stable to
mouse DHPs than to hog DHPs, especially meropenem and CL 191,638. However, for human DHP, all THF carbapenems showed excellent stability
compared to that of imipenem, with a rate <20% that for imipenem. The
hydrolysis of the THF carbapenems CL 191,121, CL 191,638, and CL
191,983 by rat intestine enzymes proceeded at a rate comparable to or
faster than that for hydrolysis of imipenem (Table 1).
Stabilities to carbapenem-hydrolyzing
-lactamases.
Many
metallo
-lactamases can hydrolyze all classes of
-lactams
including carbapenems. The THF carbapenems, including the hydrophilic
compounds with a hydrogen or amino group at the terminus of one or both
of the side chains, were also not stable to the hydrolysis by the two
metallo
-lactamases CcrA and L1 (Table 1).
-lactamases are summarized in Table
2. As initially indicated by the relative
hydrolysis rate (Table 1) for the metallo
-lactamase CcrA, all THF
carbapenems except CL 191,121 were less stable than imipenem on the
basis of the kcat value; CL 191,121 was almost
twofold more stable than imipenem. For the metallo
-lactamase
L1, all THF carbapenems were as stable as or slightly more stable than
imipenem on the basis of the kcat value.
Km values with the CcrA enzyme were lower for
THF carbapenems than for imipenem, resulting in higher
kcat/Km values. However,
on the basis of kcat values, THF carbapenems were much more stable than imipenem to hydrolysis by the
carbapenem-hydrolyzing serine
-lactamases Sme-1 and IMI-1. The
kcat values of Sme-1 and IMI-1 for the THF
carbapenems were 5 to 16 times slower than those for imipenem. Although
lower Km values were observed for THF
carbapenems than for imipenem with IMI-1 and Sme-1 (Table 2), the
catalytic efficiencies
(kcat/Km values) were
still lower for the THF carbapenems than for imipenem with the Sme-1
enzyme.
|
Stabilities to other serine
-lactamases.
All THF
carbapenems showed excellent stability to hydrolysis by serine
-lactamases in functional groups 1, 2a, 2b, and 2e (molecular classes C and A) (Table
3), with the relative hydrolysis rate for
the THF carbapenems never exceeding 1% of that for the reference
compound. The extended-spectrum
-lactamase TEM-26 hydrolyzed all the
carbapenems slowly.
|
Affinities of THF carbapenems for PBPs.
THF carbapenems bound
to PBPs from both gram-positive and gram-negative organisms, including
P. aeruginosa, with affinities comparable to those of other
carbapenems (Table 4). The good antimicrobial activities of the THF carbapenems against S. aureus (31) were consistent with tight binding to PBP 1 (Table 4). Moreover, CL 191,121 bound well to all PBPs from S. aureus. None of the THF carbapenems bound well to PBP 2a from
methicillin-resistant S. aureus BB270 (MICs, >16 µg/ml),
with the IC50s of all compounds being >100 µg/ml (data
not shown). With E. coli all three THF carbapenems exhibited
similar PBP profiles, with excellent binding to PBPs 2 and 4 (IC50s, <0.1 µg/ml). CL 191,121 had better affinity for
PBPs 1a and 1b than CL 188,624 and CL 190,294, but it still bound to
these two PBPs less effectively than imipenem or meropenem did. The
last two THF carbapenems bound to PBP 3 better than any of the
carbapenems tested other than meropenem. Despite the reduced antimicrobial activity against P. aeruginosa, the THF
carbapenems exhibited strong binding to the PBPs in P. aeruginosa, having comparable or better IC50s than
those of imipenem and biapenem for PBPs 1b, 1c, 2, and 3 (Table 4).
|
Penetration of THF carbapenems into S. marcescens
S6.
The permeability coefficients of representative
-lactams
and THF carbapenems CL 188,624, CL 190,294, and CL 191,121 are
summarized in Table 5. Cephaloridine and
imipenem are compounds that penetrate gram-negative organisms fast, as
demonstrated here and by other researchers (22, 36).
Piperacillin and cefotaxime penetrated the organisms more slowly. The
THF carbapenems, especially CL 190,294 and CL 188,624, showed good
penetrability through the porin channels of S. marcescens
S6, with permeability coefficients comparable to that of the rapidly
penetrating compound cephaloridine. CL 191,121 penetrated more slowly
than the other two THF carbapenems tested but still exhibited a rate
approximately 30% of that for cephaloridine. The THF carbapenems CL
190,294 and CL 188,624 were transported into S. marcescens
at rates similar to those for meropenem and biapenem.
|
Selection and identification of OprD2-deficient mutants.
Imipenem-resistant mutants of P. aeruginosa 27853 were
selected at a frequency of 10
7. Resistance to imipenem
with the selected mutants was confirmed by disc diffusion tests. Outer
membrane extraction with laurylsarcosine and by protein identification
by SDS-gel electrophoresis indicated that these imipenem-selected
mutants shared the same outer membrane profile as the control
OprD2-deficient strain: a loss of the OprD2 protein compared to the
outer membrane protein profile of the parent strain (Fig.
2). The MICs of imipenem, meropenem,
biapenem, and THF carbapenems for the OprD-deficient mutants in
comparison with those for the wild-type parent are summarized in Table
4. For imipenem, meropenem, and biapenem, the MICs for the resistant mutants were elevated 8- to 32-fold compared to that for the parent strain, P. aeruginosa 27853. The MICs of the THF carbapenems
were never more than twofold higher for the OprD2 mutants compared to
those for the wild-type strain.
|
| |
DISCUSSION |
|---|
|
|
|---|
Early carbapenems such as imipenem were not stable to hydrolysis
by the zinc-containing enzymes such as mammalian renal DHPs and
metallo-
-lactamases. One of the most important features that a novel
carbapenem needs to compete in the commercial marketplace is improved
stability to DHPs. As with meropenem, the addition of a 1-
-methyl
group to the
-lactam nucleus of THF carbapenems such as CL 191,121 and CL 191,983 increased the stability to mammalian DHPs.
-Lactamase production is one of the major mechanisms of bacterial
resistance to
-lactams. Although carbapenems are generally quite
stable to hydrolysis by most common
-lactamases, they are generally not stable to the class B metallo
-lactamases. Therefore, it is still essential that the stabilities of novel carbapenems to a
battery of
-lactamases from various sources be evaluated. The
evaluation of THF carbapenems for hydrolysis by the
metallo-
-lactamases CcrA and L1 indicated that hydrophilic compounds
containing a free carboxylic group were less stable to hydrolysis by
the metallo
-lactamases. Carbapenem-hydrolyzing serine
-lactamases such as IMI-1 and Sme-1 were capable of hydrolyzing
imipenem and meropenem. However, THF carbapenems such as CL 191,121 were more stable than imipenem to hydrolysis by IMI-1 and Sme-1. In
addition, THF carbapenems such as CL 191,121 were stable to hydrolysis
by the other serine
-lactamases tested.
The three compounds selected for more extensive evaluation demonstrated that the good penetrability of the THF carbapenems, especially CL 190,294 and CL 188,624, through the porin channels of S. marcescens S6, combined with their high degrees of affinity to PBPs 2 and 4 of gram-negative organisms (5), contributed to their good activities against gram-negative bacteria.
The modest antipseudomonal activities of the THF compounds were also studied. Although the penetrabilities of the THF carbapenems into members of the family Enterobacteriaceae were comparable to those of other carbapenems, penetration into P. aeruginosa appeared to be diminished. The levels of binding to essential PBPs in P. aeruginosa were comparable for biapenem and the THF carbapenems (5), but the MICs of the THF carbapenems were higher. This study demonstrated that the loss of the OprD2 protein channel had little effect upon the antipseudomonal activities of the THF carbapenems but markedly affected the activities of imipenem and biapenem (eightfold or greater increases in MICs). The differences in the MICs of the THF carbapenems for parent strain P. aeruginosa 27853 were not more than twofold compared to those for its OprD2-deficient mutants. These results indicate that THF carbapenems do not appear to use the specific imipenem-penetrating channel OprD2 as their major route for entry into P. aeruginosa. This behavior is similar to that reported for a series of carbapenems bearing a basic group at either position 1 or position 6 (e.g., BMY 45047); imipenem has a single basic group at position 2 (10). Decreased activity in P. aeruginosa appeared to be due to poor uptake through protein OprD2.
Imipenem resistance in P. aeruginosa reflects a complex
interplay between inducibility and stability to group 1 (class C)
-lactamases, uptake through porins, especially OprD2
(18), and efflux potential (12, 14). The THF
carbapenem CL 191,121 behaved as a weaker inducer than imipenem, with
at least a fivefold lower induction ratio than that for imipenem at a
concentration of one-half the MIC (data not shown). Unfortunately, the
stabilities of imipenem and CL 191,121 to hydrolysis by crude enzyme
extracts from P. aeruginosa ATCC 27852 and the
OprD2-deficient mutants were not measurable due to the relative
stabilities of both compounds and the low enzyme concentrations in the
extracts. However, with a homogeneously purified AmpC
-lactamase
from E. cloacae, CL 191,121 was almost fourfold more stable
than imipenem at 100 µM (data not shown). These data suggest that, in
addition to not using the OprD2 channel, the better stability of the
THF carbapenems to hydrolysis by an AmpC
-lactamase may contribute
to the minimal effect on the THF carbapenem MICs for imipenem-resistant
mutants. These findings correspond to Livermore's (18)
comments that "the activity of a carbapenem more
-lactamase stable
than imipenem should be less affected by the porin loss." The efflux
potentials for THF carbapenems have not been evaluated, whereas those
for the carbapenem ER-35786 and for various
-lactams have been
evaluated by Köhler et al. (12) and Li et al.
(14), respectively.
The good stability to hydrolysis by DHP and
-lactamases, efficient
binding to the target proteins, and favorable penetrability coupled
with their in vitro and in vivo antimicrobial activities support the
further evaluation of THF carbapenems. These THF carbapenems are under
investigation as orally active compounds.
| |
ACKNOWLEDGMENTS |
|---|
We thank Y.-I. Lin, P. Bitha, S. M. Sakya, T. W. Stronhmeyer, and Z. Li for synthesizing the THF carbapenems and W. Weiss for performing the antimicrobial susceptibility tests.
| |
FOOTNOTES |
|---|
* Corresponding author. Mailing address: 205/227, Infectious Disease Research Section, Wyeth-Ayerst Research, 401 North Middletown Rd., Pearl River, NY 10965. Phone: (914) 732-4466. Fax: (914) 732-2480. E-mail: Yangy{at}war.wyeth.com.
Present address: R. W. Johnson Pharmaceutical Research
Institute, Raritan, NJ 08869.
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