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Antimicrobial Agents and Chemotherapy, March 1999, p. 630-633, Vol. 43, No. 3
0066-4804/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.

Use of an Isogenic Escherichia coli Panel To Design Tests for Discrimination of beta -Lactamase Functional Groups of Enterobacteriaceae

Anton F. Ehrhardt,* Christine C. Sanders, and Ellen S. Moland

Center for Research in Anti-Infectives and Biotechnology, Department of Medical Microbiology, Creighton University School of Medicine, Omaha, Nebraska 68178

Received 21 May 1998/Returned for modification 1 September 1998/Accepted 14 December 1998


    ABSTRACT
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

A study was designed to determine if an isogenic panel of Escherichia coli strains containing many different beta -lactamases could be used for the preliminary screening of a large number of beta -lactam agents to identify which might be most useful in the development of a definitive test for specific beta -lactamases found among the members of family Enterobacteriaceae. The susceptibilities of 46 strains, comprising the isogenic panel, to expanded-spectrum cephalosporins, cephamycins, and aztreonam were determined in the presence and absence of beta -lactamase inhibitors in broth microdilution tests. The results indicated that strains producing extended-spectrum beta -lactamases (ESBLs) could be distinguished from strains producing other Bush-Jacoby-Medeiros functional group 2 or group 1 beta -lactamases. For strains producing group 1 beta -lactamases, cefpodoxime and ceftazidime MICs were >= 4 µg/ml and addition of clavulanate did not reduce the MICs more than fourfold. For strains producing group 2 enzymes other than ESBLs, cefpodoxime and ceftazidime MICs were <= 2 µg/ml. With a single exception (ceftazidime for the strain producing SHV-3), among strains producing ESBLs, cefpodoxime and ceftazidime MICs were >= 4 µg/ml and addition of clavulanate reduced the MICs by more than eightfold. Cephamycins could also be used to discriminate between strains producing group 1 beta -lactamases and ESBLs, since only the former required cefotetan concentrations as high as 8 µg/ml or cefoxitin concentrations of >16 µg/ml for inhibition. Other cephalosporins provided some discrimination between the various beta -lactamase producers, although they were not as reliable as either cefpodoxime or ceftazidime. These results indicate the utility of an isogenic panel for identification of candidate drugs among many for further testing with clinical isolates of the family Enterobacteriaceae to determine the best agents for detection of specific beta -lactamases in this family.


    INTRODUCTION
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

The single most-prevalent mechanism responsible for resistance to beta -lactam antibiotics among clinical isolates of the family Enterobacteriaceae is the production of beta -lactamase (20). Until recently, resistance mediated by beta -lactamases was readily detected by clinical microbiology laboratories through the use of a variety of routine antimicrobial susceptibility tests. Unfortunately, the appearance of new forms of certain beta -lactamases, the extended-spectrum beta -lactamases (ESBLs), and new plasmid derivatives of the AmpC beta -lactamase has made detection of resistance in routine susceptibility tests unreliable (22). Therefore, it has become necessary to develop new tests specifically for the detection of these enzymes, which may produce hidden, but clinically relevant, resistance to newer cephalosporins and aztreonam.

A number of new tests for the detection of ESBLs among clinical isolates of the family Enterobacteriaceae are currently under development (7, 10, 15, 19, 23, 25). Some of these methods involve the use of single drugs as indicators of the presence or absence of ESBLs, while others involve testing of drugs with and without beta -lactamase inhibitors. Regardless of the type of test involved, each could be performed with any one of several agents among the many beta -lactam antibiotics clinically available today. However, testing of all possible candidate drugs would not be feasible.

Therefore, a study was designed to determine if an isogenic panel of Escherichia coli strains containing many diverse beta -lactamases could be used for the preliminary screening of a large number of beta -lactam agents to identify which might be most useful in the development of a more definitive test for specific beta -lactamases found among the members of the family Enterobacteriaceae. A group of expanded-spectrum cephalosporins and a monobactam were tested, with and without beta -lactamase inhibitors, as candidates for differentiation of ESBLs from other functional group 2 enzymes, and two cephamycins were included for differentiation of functional group 1 beta -lactamases (5, 6). The isogenic panel examined consisted of a single E. coli host into which plasmids encoding various beta -lactamases had been introduced (3). This test panel has been expanded to include recently described enzymes. Forty-six strains were selected from the complete panel for use in this study. The strains selected produced beta -lactamases of groups 1, 2b, 2be, 2c, and 2d of the Bush-Jacoby-Medeiros classification scheme (6). Testing in this panel eliminates the confounding influences of intrinsic susceptibility differences between various host organisms. This makes it possible to examine directly the effect of specific beta -lactamases on the results obtained. A potential disadvantage of using this defined panel is that all testing is done in a laboratory strain of a single species; hence, results obtained with such a panel may not be the same as those obtained with clinical isolates of the same or a different species. Therefore, this initial study was used to identify candidate drugs and/or inhibitor-drug combinations which could then be tested against large numbers of clinical isolates to evaluate their utility in tests performed by clinical laboratories.

(A portion of this work was presented at the 37th Interscience Conference on Antimicrobial Agents and Chemotherapy, Toronto, Ontario, Canada, 28 September to 1 October 1997 [8].)


    MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Strains. The test panel consisted of 46 strains of E. coli C600N, a nalidixic acid-resistant mutant of strain C600 (thr-1 leuB6 lacY1 supE44 rfbD1 thi-1 tonA21 lambda -), containing beta -lactamase-encoding plasmids (3). beta -Lactamases expressed by the panel organisms are listed in Table 1 and include enzymes representing functional groups 1, 2b, 2be, 2c, and 2d (6). Plasmids were introduced into the C600N host strain through standard transformation (electroporation or chemical transformation) or conjugation techniques (18). Strains were stored at -70°C until used and were grown on Luria-Bertani agar, Miller (Difco, Detroit, Mich.), containing ampicillin (20 µg/ml) where necessary for plasmid maintenance. For quality control purposes, E. coli ATCC 25922 was also included in the testing.

                              
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TABLE 1.   beta -Lactamases and plasmids included in the E. coli test panel

Susceptibility testing. Antibiotic susceptibility testing was performed according to standard National Committee for Clinical Laboratory Standards microdilution methods (13), using dehydrated investigational panels prepared by Dade MicroScan, Inc. (Sacramento, Calif.). Drugs contained in the panels were cefpodoxime, ceftazidime, cefotaxime, ceftriaxone, aztreonam, cefoxitin, and cefotetan. Cefoxitin and cefotetan were tested in the concentration range 0.12 to 16 µg/ml, alone and in combination with sulbactam (8 µg/ml). The remaining drugs were tested in the range 0.06 to 8 µg/ml or 0.12 to 16 µg/ml, alone and in combination with sulbactam (8 µg/ml) or clavulanate (1, 2, or 4 µg/ml).


    RESULTS
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

Ranges of MICs for the drugs when tested alone against the test panel are shown in Table 2. Cefpodoxime was the only agent that by itself was able to discriminate between all strains producing groups 1 or 2be enzymes and strains producing other group 2 beta -lactamases, though ceftazidime was nearly as effective. Cefpodoxime and ceftazidime MICs were >= 4 µg/ml only in tests with strains producing group 1 or 2be beta -lactamases. A ceftazidime MIC of 0.5 µg/ml was obtained for the strain producing SHV-3, thus yielding its only MIC range overlap. MIC ranges for aztreonam and the other expanded-spectrum cephalosporins overlapped for all groups, although generally higher MICs were obtained in tests with strains producing beta -lactamases of functional group 1 or 2be (Table 2). The only other clear separation that was possible with single-drug testing was the identification of group 1-producing strains on the basis of cefoxitin or cefotetan MICs (Table 2). Cefoxitin MICs of >16 µg/ml and cefotetan MICs of >= 8 µg/ml were obtained only in tests with strains producing group 1 beta -lactamases.

                              
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TABLE 2.   MIC ranges obtained in tests with strains producing beta -lactamases of various functional groups

Individual drugs yielded wide ranges of MICs within enzyme groups 1 and 2be, through the number of nonconforming enzymes differed depending on the drug tested. All group 1 enzyme producers yielded cephalosporin MICs of >= 16 µg/ml except for ceftazidime in strains producing AmpC(i) (MIC, 0.5 to 1 µg/ml) and cefotaxime and ceftriaxone in strains producing AmpC(i) (MIC, 0.5 to 1) or FOX-1 (MIC, 2 µg/ml). Aztreonam MICs for group 1-producing strains were split, with LAT-1-, MIR-1-, and AmpC(hy)-producing strains having MICs of >= 16 µg/ml and the others yielding low values (FOX-1-producing strains, 0.5 µg/ml; AmpC(i)-producing strains, 0.25 µg/ml; and AmpC(c)-producing strains, <= 0.12 µg/ml). Group 2be producers also generated cefpodoxime and ceftazidime MICs that were generally >= 16 µg/ml, with the following exceptions: the cefpodoxime MIC for the SHV-6-producing strain was 4 to 8 µg/ml, while that for the TEM-12- and TEM-43-producing strains was 8 µg/ml; the ceftazidime MIC for the SHV-2-producing strain was 4 to 8 µg/ml, and that for the SHV-3-producing strains was 0.5 µg/ml. Cefotaxime and ceftriaxone MICs for the group 2be producers were predominantly <16 µg/ml. The cefotaxime MICs for the group 2be-producing strains were as follows: for the SHV-6 and TEM-12 producers, 0.25 µg/ml; for the TEM-7 and TEM-43 producers, 0.5 µg/ml; for the TEM-10 producer, 1 µg/ml; for the TEM-28 producer, 2 µg/ml; for the SHV-3 and TEM-8 producers, 4 µg/ml; for the TEM-5 and TEM-8 producers, 8 µg/ml; and for the SHV-2 producers, 8 to 16 µg/ml. The ceftriaxone MICs for the group 2be-producing strains were as follows: for the TEM-12 producer, 0.25 µg/ml; for the SHV-6 and TEM-43 producers, 0.5 µg/ml; for the TEM-7-producing strain, 1 µg/ml; for the TEM-10 producer, 2 µg/ml; for the TEM-8, TEM-43, and SHV-3 producers, 4 µg/ml; and for the SHV-2-producing strains, 8 to 16 µg/ml. Aztreonam MICs for group 2be producers were >= 16 µg/ml except for the strains producing SHV-3 and -6 (0.25 µg/ml), TEM-12 (1 µg/ml), SHV-2 (2 to 4 µg/ml), TEM-7 (4 µg/ml), and TEM-3 and -43 (8 µg/ml). These results indicated that two of the tested drugs, ceftazidime and cefpodoxime, produced markedly fewer nonconforming results and might yield more-reliable discriminations among large groups of enzymes.

The influence of the addition of a beta -lactamase inhibitor on the MIC, expressed as the fold reduction in MIC compared to the value for each drug when tested alone, for strains producing group 1 or 2be enzymes is presented in Table 3. The use of cefpodoxime in combination with 1, 2, or 4 µg of clavulanate/ml allowed the separation of strains producing group 1 beta -lactamases from those producing group 2be enzymes. Cefpodoxime MICs in tests with only the latter strains were reduced eightfold or more by clavulanate. Similar separations of strains producing group 1 and 2be beta -lactamases were possible with ceftazidime plus 1 or 2 µg of clavulanate/ml, cefotaxime plus 1 µg of clavulanate/ml, or aztreonam plus 1 or 2 µg of clavulanate/ml. Addition of sulbactam did not allow discrimination between these two functional groups with any of the drugs tested (Table 3). Addition of beta -lactamase inhibitors to the drugs did not improve discrimination between strains producing other group beta -lactamases (data not shown).

                              
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TABLE 3.   Influence of addition of beta -lactamase inhibitors on MICs obtained in tests with strains producing functional group 1 or 2be beta -lactamases

The other cephalosporins examined in this study provided some differentiation between strains producing different beta -lactamases, though not as reliably as cefpodoxime or ceftazidime. Although ceftriaxone MICs were <4 µg/ml in tests with strains producing TEM-7, -10, or -12 or SHV-6, addition of clavulanate at 2 µg/ml did cause more than a fourfold reduction in all cases except that of the TEM-12 producer (Table 3). Cefotaxime MICs were <4 µg/ml in tests with strains producing TEM-7, -10, -12, -28, or -43 or SHV-6, but addition of clavulanate at 2 µg/ml reduced cefotaxime MICs by more than fourfold except in tests with the strains producing TEM-12 and SHV-6. Therefore, cefpodoxime or ceftazidime, alone or in combination with clavulanate, allowed the most reliable separations of the test strains, followed by ceftriaxone and cefotaxime (in that order).


    DISCUSSION
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

This study examined the ability of individual drugs or drug-inhibitor combinations to distinguish between strains of an isogenic test panel producing enzymes of functional groups 1 and 2. Initial screening of the seven primary beta -lactam drugs alone allowed us to select two cephalosporins, cefpodoxime and ceftazidime, which were most capable of discriminating between the different functional groups. Either of these drugs was generally capable of dividing the panel strains into two categories, those producing an enzyme of either group 1 or 2be and those producing other group 2 beta -lactamases. When used alone, however, these agents were not capable of further discrimination within these categories. Given that the group 1 (AmpC-type) and group 2be (ESBL) enzymes are of greater clinical concern than the other enzymes tested, we then focused on methods to discriminate these two groups from each other. Both testing in combination with beta -lactamase inhibitors and independent testing with cephamycins were found to effectively discriminate between these two groups.

The best separations were produced by testing with cefpodoxime alone or in combination with clavulanate at 2 µg/ml. Cefpodoxime MICs of less than 4 µg/ml were observed only in tests with strains elaborating beta -lactamases of group 2b, 2c, or 2d. No other test further distinguished between these three groups. Cefpodoxime MICs of >= 4 µg/ml were observed only in tests with strains elaborating beta -lactamases of group 1 or 2be. These two groups could then be distinguished from each other either by the presence of elevated MICs in tests with cephamycins (group 1 enzymes) or by the eightfold or greater reduction in cefpodoxime MICs by clavulanate at 2 µg/ml (group 2be enzymes). Clavulanate was not tested in combination with cephamycins because these drugs were included to aid in the detection of group 1 enzymes and clavulanate is an ineffective inhibitor of these beta -lactamases.

Although the screening of candidate drugs and drug-inhibitor combinations and the interpretation of the results are simplified by the use of an isogenic background, this process also has its shortcomings. The host strain used in these studies is a laboratory strain of E. coli and is intrinsically more susceptible to many antibacterial agents than its clinical counterparts. Additionally, the intrinsic beta -lactam susceptibilities of other clinically important species of the family Enterobacteriaceae producing ESBLs and AmpC-type enzymes are quite different from those of the E. coli C600N host. Thus, results from testing in this isogenic background may not be directly applicable to strains encountered in the clinical laboratory. This may be especially true for Enterobacteriaceae species that are not intrinsically susceptible to cefpodoxime, the single most-useful beta -lactam drug in tests with this E. coli panel. For this reason, it was important to identify additional drugs that functioned relatively well in the test panel.

Ceftazidime and ceftazidime-clavulanate were essentially as reliable as cefpodoxime and cefpodoxime-clavulanate for discrimination of enzymes from the three general groups (functional group 1, group 2be, and other group 2 enzymes). Using the same criteria outlined for cefpodoxime above, the only enzyme not easily discriminated by ceftazidime and ceftazidime-clavulanate was SHV-3. This shortcoming may be of limited importance since SHV-3 is not a prevalent ESBL. Ceftriaxone and cefotaxime, with and without clavulanate, were also able to provide some discrimination, although they were much less reliable than ceftazidime or cefpodoxime. The ability of the cephamycins to distinguish between strains producing group 1 and 2be beta -lactamases in this study may be of limited value in tests with clinical strains. Isolates of Klebsiella pneumoniae that produce ESBLs may undergo porin changes that produce resistance to cephamycins (16, 17). Furthermore, many Enterobacteriaceae species that produce ESBLs, like Enterobacter, Citrobacter, and Serratia species, are intrinsically resistant to the cephamycins. Thus, the major use of this test panel of E. coli was in the identification of the best candidate drugs for further testing. The validity of this approach awaits evaluation in a similar study with clinical isolates (21).


    ACKNOWLEDGMENTS

This study was supported by a grant from Dade MicroScan, Inc.

We thank all of the investigators who generously provided enzyme-encoding plasmids, Stacey Morrow and Stacey Edward for technical assistance, and Patricia Bradford and Nancy Hanson for the inception and maintenance of the C600N panel.


    FOOTNOTES

* Corresponding author. Mailing address: Center for Research in Anti-Infectives and Biotechnology, Department of Medical Microbiology, Creighton University School of Medicine, 2500 California Plaza, Omaha, NE 68178. Phone: (402) 280-1881. Fax: (402) 280-1225. E-mail: antone{at}creighton.edu.


    REFERENCES
Top
Abstract
Introduction
Materials and methods
Results
Discussion
References

1. Alksne, L. E., and B. A. Rasmussen. 1997. Expression of the AsbA1, OXA-12, and AsbM1 beta -lactamases in Aeromonas jandaei AER 14 is coordinated by a two-component regulon. J. Bacteriol. 179:2006-2013[Abstract/Free Full Text].
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Antimicrobial Agents and Chemotherapy, March 1999, p. 630-633, Vol. 43, No. 3
0066-4804/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.



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