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Antimicrobial Agents and Chemotherapy, June 1999, p. 1362-1366, Vol. 43, No. 6
Antibiotic Group, Department of Medical
Microbiology, St. Bartholomew's and the Royal London School of
Medicine and Dentistry, London, E1 2AD, United
Kingdom,1 and Section of Infectious
Diseases, Department of Internal Medicine, Hacettepe University
School of Medicine, 06100 Ankara, Turkey2
Received 16 June 1998/Returned for modification 24 November
1998/Accepted 12 March 1999
Pseudomonas aeruginosa isolates 871 and 873 were
isolated at Hacettepe University Hospital in Ankara and were highly
resistant to ceftazidime (MIC, 128 µg/ml). Each produced three
The most frequent mechanisms of
resistance to extended-spectrum cephalosporins in
Pseudomonas aeruginosa are derepression of the
chromosomal AmpC In the present study we describe a further ESBL mutant of the OXA-10
enzyme, obtained from two P. aeruginosa isolates collected in Turkey.
Bacterial strains and plasmids.
P. aeruginosa isolates
871 and 873 were isolated in February and March 1992, respectively,
from patients treated for burns at Hacettepe University Hospital,
Ankara, Turkey. They were believed to be isolates of the same strain,
since they had identical enzyme DNA restriction patterns
(5). Previous work showed that they produced PER-1
0066-4804/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
OXA-17, a Further Extended-Spectrum Variant of
OXA-10
-Lactamase, Isolated from Pseudomonas
aeruginosa
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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-lactamases, with pIs of 5.3, 6.1, and 7.9. The
-lactamase with a pI of 5.3 was previously shown to be
PER-1 enzyme. The antibiograms of the isolates were not entirely
explained by production of PER-1 enzyme, insofar as ceftazidime
resistance was incompletely reversed by clavulanate. The enzymes with
pIs of 6.1 and 7.9 were therefore investigated. The enzyme with a pI of
6.1 proved to be a novel mutant of OXA-10, which we designated OXA-17,
and had asparagine changed to serine at position 73 of the protein.
When cloned into Escherichia coli XL1-blue, OXA-17 enzyme
conferred greater resistance to cefotaxime, latamoxef, and cefepime
than did OXA-10, but it had only a marginal (two- to fourfold) effect
on the MIC of ceftazidime. This behavior contrasted with that of
previous OXA-10 mutants, specifically OXA-11, -14, and -16, which
predominately compromise ceftazidime. Extracted OXA-17 enzyme had
relatively greater activity than OXA-10 against oxacillin, cloxacillin,
and cefotaxime but, in terms of
kcat/Km, it had lower
catalytic efficiency against most
-lactams. The enzyme with a pI of
7.9 was shown by gene sequencing to be OXA-2.
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INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-lactamase and increased efflux
(1). Extended-spectrum
-lactamases (ESBLs)
are a greater problem in members of the family
Enterobacteriaceae (19). Only one TEM-related ESBL has so far been described from P. aeruginosa
(24); nevertheless, several other potent plasmid-mediated
-lactamases have been described from the species. These
include the IMP-1 zinc
-lactamase (34), PER-1, which is a class A ESBL (25) that is widespread in
Turkey (5, 26, 31); and several extended-spectrum mutants of
class D
-lactamases (4, 6, 10). The last
group includes the OXA-11, -14, and -16 derivatives of OXA-10
-lactamase (4, 8, 10), the OXA-15 derivative
of OXA-2 enzyme (6), and the OXA-18 enzyme, which is closely
related to the OXA-12 and AmpS chromosomal enzymes of Aeromonas
sobria (27, 29, 33).
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-lactamase together with
-lactamases that
had pIs of 6.1 and
7.7 and that they carried a gene which hybridized with a probe to blaOXA-10 (5).
-lactams (Table
1), and ceftazidime resistance was less
completely reversed by clavulanate (4 µg/ml) than in strains with
PER-1
-lactamase alone (5). P. aeruginosa PU21 ilv leu Strr
Rifr (12) and a ciprofloxacin-resistant
derivative, obtained as described previously (7, 9), were
used as recipients in transconjugation. Escherichia coli
XL1-blue MRF' was used as a recipient in transformation experiments
with the pBC SK+ cloning vector (Stratagene, La Jolla, Calif.).
P. aeruginosa PU21 transconjugants with plasmids pMG40
(encoding OXA-2
-lactamase), pMLH51 (OXA-10) (10,
20), pMLH52 (OXA-11) (10), pMLH53 (OXA-14)
(4), and pMLH57 (PER-1) (7) were used as
producers of reference
-lactamases. An E. coli K-12 transconjugant with plasmid R46 was used as a further
reference producer of OXA-2
-lactamase (2).
E. coli NCTC 50192, with plasmids of 154, 66, 38, and 7 kb, was used in plasmid sizing (32).
TABLE 1.
MICs of
-lactams for P. aeruginosa isolates
871 and 873
Antibiotics and susceptibility tests. MICs were determined on DST agar (Unipath, Basingstoke, Hampshire, United Kingdom) with inocula of 104 CFU per spot. Antibiotics were supplied by the following manufacturers: aztreonam and cefepime, Bristol Myers Squibb, Syracuse, N.Y.; cefsulodin, Novartis, Basel, Switzerland; ceftazidime, Glaxo-Wellcome, Stevenage, Hertfordshire, United Kingdom; ciprofloxacin, Bayer, Newbury, Berkshire, United Kingdom; piperacillin sodium and tazobactam, Wyeth, Taplow, Berkshire, United Kingdom; cephalothin and moxalactam, Lilly, Basingstoke, Hampshire, United Kingdom; imipenem, Merck Sharp and Dohme, Hoddesdon, Hertfordshire, United Kingdom; ceftriaxone, Roche, Welwyn Garden City, Hertfordshire, United Kingdom; cefotaxime and cefpirome, Roussel, Uxbridge, Middlesex, United Kingdom; benzylpenicillin, cephaloridine, cloxacillin, oxacillin, gentamicin, and rifampin, Sigma, St. Louis, Mo.; ampicillin sodium, carbenicillin disodium, and clavulanate lithium, SmithKline Beecham, Brentford, Middlesex, United Kingdom; and meropenem, Zeneca, Macclesfield, Cheshire, United Kingdom.
Plasmid transfer to P. aeruginosa PU21. Logarithmic-phase cells of P. aeruginosa 871 and 873 were mated overnight with P. aeruginosa PU21cipr on DST agar, as described previously (7, 9). Transconjugants were selected on the same medium containing ciprofloxacin (30 µg/ml) plus either ceftazidime (25 or 50 µg/ml) or gentamicin (30 µg/ml).
Detection of
-lactamases and their genes.
-Lactamases were characterized by isoelectric focusing of ultrasonic
extracts prepared from overnight nutrient agar cultures (22). For probing, which was undertaken as described
previously (4, 10) total DNA was extracted and then digested
with BamHI (when probing for
blaOXA-10) or HincII (when probing
for blaOXA-2) (Promega, Madison, Calif.). The
probe for blaOXA-10 was made by PCR
amplification of a DNA fragment from pMLH51 with primers ABD1 and ABD4
(Fig. 1). The probe for
blaOXA-2 was made similarly from plasmid
R46, with primers AH1 (GGAAAAGTCCATGGCAATCCGAATCTT)
and AH2 (TTATCGCGCAGCGT-CCGAGTT [complementary
strand]), corresponding to coordinates 118 to 144 and 955 to 935, respectively, in the sequence published by Danel et al. (6).
The amplified fragments were labeled with digoxigenin with a DIG DNA
labeling and detection kit (Boehringer, Lewes, East Sussex, United
Kingdom).
|
Cloning
-lactamase genes.
Total DNA was
extracted from the P. aeruginosa isolates 871 and 873 and
transconjugant PU21(pMLH51) by a guanidium thiocyanate method
(28). Two-microgram amounts of DNA from the test strain and
of the vector pBC SK+ were then digested separately with restriction enzymes as follows: BamHI, HindIII, or
PstI (Promega) for DNA from isolates 871 and 873 or
BamHI only for DNA from strain PU21(pMLH51). The digestion
conditions were as advised by the supplier of the enzymes. After
digestion, the DNA was ligated and transformed into E. coli
XL1-blue by electroporation, as described previously (6).
Transformants were selected on Luria-Bertani agar (30) containing ampicillin (10 µg/ml).
Sequencing the
-lactamase gene.
The
OXA-10-related genes from isolates 871 and 873 were amplified by PCR
with ABD1 and 5' biotin-labeled ABD4 (Fig. 1) as primers. The products
were sequenced by chain termination with ABD1, ABD2, and ABD3 primers,
exactly as described by Hall et al. (10). The OXA-2-related
gene was amplified with AH1 and 5' biotin-labeled AH2 and then
sequenced with primers AH1 (see above); AH3, GCCTGCATCGACATTCAAGA
(coordinates 434 to 453 in the sequence published by Danel et al.
[6]); AH4, GCTCGGCGCTATTTGAAGAA (536 to
555); and AH5, TCGCAACTGGATACTGCGTG (833 to 851).
-Lactamase purification.
An E. coli XL1-blue
transformant with the cloned OXA-17
-lactamase was grown
overnight, with shaking, at 37°C in 0.6 liters of Luria-Bertani broth
and then diluted into 12 liters of fresh, warm, identical medium. After
5 h of incubation at 37°C, the bacteria were harvested by
centrifugation at 5,000 × g for 15 min at 37°C and
washed once in 20 mM triethanolamine buffer, pH 7.6. The pellet was
resuspended in the same buffer and frozen and thawed six times. Further
purification was undertaken as for OXA-16 enzyme, with one anion- and
one cation-exchange chromatographic fractionation (8).
OXA-10
-lactamase was purified from P. aeruginosa PU21(pMLH51) as described previously (7, 8).
-Lactamase purity was estimated by sodium dodecyl
sulfate-polyacrylamide gel electrophoresis on the gel system of
Lugtenberg et al. (21). Protein concentrations were
determined by the micro-bicinchoninic acid method (Pierce, Rockford,
Ill.).
-Lactamase spectrophotometric assays.
The hydrolytic
activities of
-lactamases were assayed by UV
spectrophotometry at 37°C in phosphate buffer at pH 7.0 (7, 10). The wavelengths were as listed by Danel et al. (4,
7), and kinetic parameters were determined from initial rate
data, using the Enzfitter program (18).
Nucleotide sequence accession number. The GenBank database accession number for the sequence described in Fig. 1 is AF060206.
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RESULTS |
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Susceptibilities and
-lactamases of P. aeruginosa isolates 871 and 873.
Extracts of isolates 871 and 873 yielded
-lactamases that focused at pIs 5.3, 6.1, and 7.9. The enzyme with a pI of 5.3 corresponded to PER-1, as
shown previously (5); the other two enzymes were characterized in this study.
Restriction patterns of DNA digests and hybridization with gene
probes for OXA-10 and -2
-lactamases.
DNA from
isolates 871 and 873 hybridized with both the
blaOXA-2 and blaOXA-10
probes, whereas DNA from PU21(pMG40) hybridized with only the
blaOXA-2 probe and DNA from
PU21(pMLH51) bound only the blaOXA-10 probe.
Sequencing blaOXA-10 and
blaOXA-2 genes from isolates 871 and 873.
The blaOXA-10-related genes were amplified from
both isolates by PCR, and base sequences corresponding to positions 179 to 912 of blaOXA-10 (11) were
determined (see Fig. 1). This allowed prediction of the protein
sequence except for the first 16 amino acids, which are part of the
signal peptide, and the last 5 residues. Both isolates had the same
base substitution compared with blaOXA-10, with
guanine replacing adenine at position 192, predicting a change of
asparagine to serine at position 73 of the protein. This new
-lactamase was named OXA-17.
Cloning of blaOXA-17 into E. coli XL1-blue.
The presence of three
-lactamases in isolates 871 and 873 complicated
purification of the OXA-17 enzyme and determination of its contribution
to resistance. Transconjugation experiments did not achieve transfer of
any of the
-lactamase genes, and cloning into E. coli XL1-blue was adopted to separate OXA-17 from the other
-lactamases. Transformants resistant to ampicillin at 10 µg/ml were obtained from both isolates, and crude
-lactamase extracts were prepared from representatives
containing recombinant plasmids with inserts of different sizes. These
extracts were subjected to isoelectric focusing (Table
2). Transformants with only the
-lactamase that focused at pI 6.1 hybridized with the probe to blaOXA-10 but not with that to
blaOXA-2; those with the
-lactamase that focused at pI 7.9 showed the reverse
hybridization pattern (Table 2). Transformants with each of these
patterns were observed from each of the isolates 871 and 873. No
producer of PER-1
-lactamase (pI 5.3) was detected by
isoelectric focusing from any of the libraries.
|
-lactamase gene from P. aeruginosa PU21(pMLH51) was cloned and transformed into E. coli XL1-blue. Two transformants were obtained by selection on
ampicillin (10 µg/ml), and each contained a 16-kb plasmid which
encoded the
-lactamase.
Susceptibilities of the E. coli transformants with
OXA-17 and -2
-lactamases.
Susceptibility tests
were performed on representative E. coli XL1-blue
transformants with different inserts encoding OXA-17 and -2
-lactamases (Table 3).
Transformants with OXA-17
-lactamase (pI 6.1) from the
BamHI, PstI, and HindIII libraries
possessed similar resistance profiles. Both the cloned OXA-17 and
OXA-10
-lactamases increased the MICs of amino and
carboxy penicillins and cefoperazone for E. coli XL1-blue by
64- to 128-fold and raised those of aztreonam and ceftriaxone by 8- to
16-fold. In addition, production of OXA-17 enzyme, but not OXA-10,
increased the MICs of cefotaxime, cefsulodin, ceftazidime, latamoxef,
and cefepime by at least fourfold. Neither the OXA-10 nor the OXA-17
enzyme protected against carbapenems.
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-lactamase showed resistance to
ampicillin and carbenicillin and had reduced susceptibilities to piperacillin, ceftazidime, and cefoperazone, whereas susceptibilities to cefotaxime, ceftriaxone, cefsulodin, cefepime, cefpirome (not shown), aztreonam, and imipenem were not significantly altered.
Purification of OXA-17
-lactamase.
An E. coli XL1-blue MRF' transformant from the HindIII
library of P. aeruginosa 871 was used as a source of enzyme
for purification to preclude contamination by any of the other
-lactamases produced by the original P. aeruginosa isolates. OXA-10
-lactamase was purified
from P. aeruginosa PU21(pMLH51). For both enzymes, the final
purity exceeded 99%; 12 liters of culture yielded 4.4 mg of pure
OXA-17
-lactamase and 3.75 mg of OXA-10 protein.
Kinetic parameters of the OXA-17
-lactamase.
Unlike other OXA-10 derivatives (4, 8, 10), OXA-17
-lactamase gave linear kinetics for all of the
substrates tested. The lowest Km was for
penicillin G (34 µM), whereas values between 153 and 300 µM were
seen for oxacillin, ampicillin, carbenicillin, and cephalothin and
values of 500 to 600 µM were seen for cloxacillin and ceftriaxone.
The highest Kms (>2,000 µM) were for
cefotaxime and cephaloridine (Table 4).
The kcat exceeded 100 s
1 only for
oxacillin; the values for all of the other
-lactams were less than
30 s
1. In term of
Kcat/Km, the best
substrate was oxacillin, followed by penicillin G and ampicillin,
whereas kcat/Km, values
for other substrates were at least 20-fold lower than for oxacillin.
Hydrolysis of ceftazidime and carbapenems was not detected. For
comparison, Table 4 also shows kinetic data for OXA-10
-lactamase, which had biphasic kinetics for many
substrates. OXA-17 generally had higher Km
values than OXA-10 for cephalosporins and, except for cefotaxime,
had lower kcat rates for both penicillins and
cephalosporins.
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| |
DISCUSSION |
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Isolates 871 and 873 were previously found to have PER-1
-lactamase together with two further
-lactamases, one with a pI of 6.1 and the other with a
pI of 7.9 (5). DNA from each isolate hybridized with a probe
to blaOXA-10, and the enzyme with a pI of 6.1 was surmised to be related to OXA-10. The
-lactamase
with a pI of 7.9 type was wrongly proposed to be an AmpC type
(5). It appeared likely that one or both of these enzymes
contributed to the resistance phenotype of the isolates, since their
ceftazidime resistances were only partly reversed by clavulanate (Table
1) whereas strains with PER-1
-lactamase alone became
highly sensitive to ceftazidime in the presence of this inhibitor.
The present study confirmed that the two isolates had an OXA-10-related
enzyme, and sequencing revealed this to be a new variant, OXA-17, with
serine replacing asparagine at position 73. In addition, the studies
revealed that the enzyme with a pI of 7.9 was OXA-2, not AmpC. OXA-17
-lactamase, like OXA-10, increased the MICs of
ampicillin, piperacillin, carbenicillin, ceftriaxone, cefoperazone, and
aztreonam. Additionally, and unlike OXA-10, OXA-17 conferred protection
against cefotaxime, latamoxef, cefsulodin, cefepime, and, marginally,
ceftazidime. The small effect on the MIC of ceftazidime was in contrast
to those of the previously described ESBL mutants of OXA-10, namely,
OXA-11, -14, and -16, all of which give high-level ceftazidime
resistance (MIC > 128 µg/ml). Unlike OXA-17, these enzymes all
have glycine replaced by aspartate at position 157, and this may be
critical to ceftazidime resistance. The only previous OXA-10 relative
to have serine at position 73 was OXA-13, which gave no resistance to
cefotaxime or ceftazidime in P. aeruginosa although it did
reduce the susceptibility of E. coli, especially to
cefotaxime (23). However, comparison is complicated by the fact that OXA-13 has nine other amino acid differences from OXA-10, although two of these lie in the signal peptide. However, seven of the
nine differences in the mature OXA-13 protein, but not the serine at
position 73, are present in OXA-7, which is not an ESBL.
The mutation in OXA-17 lies close to the first conserved element of class D enzymes (15, 17), which contains the active serine. This is in contrast to the mutations in previous OXA-10 ESBLs, which lie at positions 124, 143, and 157, and to the mutations that give ESBL activity in TEM and SHV enzymes, which affect critical residues that fold towards the active serine but are remote from it in the primary sequence (16).
OXA-17 was more active than OXA-10 against oxacillin, cloxacillin, and
cefotaxime and had a higher kcat for cefotaxime.
Once purified, however, OXA-17 was less efficient (lower
kcat/Km than OXA-10
against all the
-lactams tested
even those to which it gave greater
resistance than OXA-10. This reduced efficiency was largely because the
kcat values for OXA-17 were low, especially for
penicillins and cephaloridine. A low kcat can
arise as an artifact if an enzyme is impure, but this seems unlikely
because only a single band was detected by sodium dodecyl
sulfate-polyacrylamide gel electrophoresis; furthermore, the elution
peak from the final chromatography purification was symmetrical with
its height (not shown). It may be that some of the purified enzyme was
not active. In this context it should be noted that OXA-17
-lactamase, unlike other OXA-10 derivatives (4,
8), was purified from E. coli and not P. aeruginosa. Maybe much of the enzyme is not correctly folded in
E. coli. This might also explain why cloned OXA-10 family
-lactamases tend not to be stable in E. coli
(unpublished observations). Alternatively, the OXA-17 enzyme may have
been partially denatured during purification or may genuinely be less
efficient than the other members of the family in hydrolyzing
-lactams, though with equally good substrate binding.
The emergence in P. aeruginosa of an OXA-10 variant that
gives greater resistance to cefotaxime than to other
oxyimino-aminothiazolyl cephalosporins may seem surprising, because
cefotaxime is not therapeutically useful against P. aeruginosa infections. It may be that the mutation emerged by
chance, or it may have been selected by low-level ceftazidime exposure
or the enzyme may have transferred from another species. The absence of
transmissibility from isolates 871 and 873 does not preclude the last
possibility: plasmids from other species often transfer into P. aeruginosa but then cannot replicate and become chromosomally
associated (13). The contributions of PER-1, OXA-2, and
OXA-17 enzymes to the resistance of the original P. aeruginosa isolates is unclear, but each enzyme appeared able to
contribute to give protection against ceftazidime (Table 4). Finally,
it should be added that the evolution of P. aeruginosa strains with such complex arrays of potent
-lactamases
is striking: the species has not, historically, been a major host for
single secondary
-lactamases, which have remained much
rarer than in members of the family Enterobacteriaceae
(19).
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FOOTNOTES |
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* Corresponding author. Present address: Pharmaceuticals Division, Pharma Research Preclinical Infectious Disease, F. Hoffmann-La Roche Ltd., CH-4070 Basel, Switzerland. Phone: 41-61-6880537. Fax: 41-61-6882729. E-mail: franck.danel{at}roche.com.
Present address: Antibiotic Reference Unit, Laboratory of Hospital
Infection, Central Public Health Laboratory, London, NW9 5HT, United Kingdom.
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