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Antimicrobial Agents and Chemotherapy, February 2003, p. 658-664, Vol. 47, No. 2
0066-4804/03/$08.00+0 DOI: 10.1128/AAC.47.2.658-664.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Johanne Blais, Suzanne Chamberland,
Monica Hoang, Craig Park, Christin Chan, Kristina Mathias, Samia Hakem, Kelly Dupree, Eric Liu, Tien Nguyen, and Michael N. Dudley*
Essential Therapeutics, Inc., Mountain View, California 94043
Received 25 June 2002/ Returned for modification 24 September 2002/ Accepted 15 November 2002
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The genetic determinant of methicillin resistance in staphylococci has been identified as the mec DNA. This 30- to 50-kb region of foreign DNA is found only in methicillin-resistant staphylococci (39). This DNA region contains the gene mecA encoding PBP 2a, which has low affinity for ß-lactam antibiotics (5-6).
Resistance to ß-lactams among other gram-positive bacteria has been reported with increasing frequency. High-level ampicillin resistance is frequently observed in vancomycin-resistant Enterococcus faecium (24). This high-level resistance is mediated by overproduction of some PBPs and a further decrease in the affinity of these enzymes for ß-lactam antibiotics (13). Penicillin resistance can now be found in 25% of clinical isolates of Streptococcus pneumoniae and viridans group streptococci worldwide (18). Resistance to penicillins and cephalosporins in streptococci is mediated by target site mutations in PBPs (6, 13, 32, 35).
ß-Lactamase enzymes are responsible for resistance to antimicrobial therapy (2) In bacteria, the genes coding for these enzymes can be found on the chromosome, on plasmids, or on transposable elements (17). Currently, more than 90% of Staphylococcus aureus isolates worldwide are resistant to penicillin (8, 29, 31). The resistance genes have spread from staphylococci, and in 1982, penicillinase genes were first reported in Enterococcus faecalis (25-26).
Four immunotypic variants of S. aureus ß-lactamase, termed A, B, C, and D, have been identified and characterized (19, 41). S. aureus ß-lactamases are penicillin-hydrolyzing enzymes inhibited by clavulanic acid and, as such, are part of group 2a of Bush's classification (2).
RWJ-54428 is a new cephalosporin with a broad gram-positive spectrum of activity, which includes methicillin-resistant S. aureus (MRSA), methicillin-resistant coagulase-negative staphylococci, enterococci, and pneumococci highly resistant to other ß-lactam antibiotics (3). This paper summarizes studies that were performed to determine the affinity of RWJ-54428 for several PBPs of Staphylococcus, Enterococcus, and Streptococcus and the stability of RWJ-54428 to relevant ß-lactamases.
(Part of this work was previously disclosed in poster presentations [S. Chamberland, C. Chan, J. Blais, K. M. Mathias, F. Malouin, and V. J. Lee, Abstr. 37th Intersci. Conf. Antimicrob. Agents Chemother., abstr. F-178, 1997; M. K Hoang, S. Chamberland, D. Griffith, and M. Dudley, Abstr. 38th Intersci. Conf. Antimicrob. Agents Chemother., abstr. F-016, 1998; T. Nguyen, E. Liu, F. Malouin, J. Blais, and S. Chamberland, Abstr. 38th Intersci. Conf. Antimicrob. Agents Chemother., abstr. F-017, 1998].)
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Antibiotics. RWJ-54428 was supplied as the mono-methanesulfonate salt. A stock solution of 2 mg of active RWJ-54428/ml was prepared in a 1:1 solution of dimethyl sulfoxide-sterile water. For the PBP binding assay, a stock solution of 5 mg of RWJ-54428/ml was prepared in sterile water. Commercially available antibiotics were obtained from various sources: ampicillin, cefaclor, cefamandole, cefazolin, cefotaxime, ceftazidime, cephalothin, cephaloridine, erythromycin, methicillin, nafcillin, oxacillin, penicillin G, and vancomycin were obtained from Sigma Chemical Co. Imipenem-cilastatin (Primaxin) was purchased from Merck. All antibiotics, except imipenem and erythromycin, were prepared at a concentration of 10 mg/ml in sterile water. Imipenem was prepared at a concentration of 5 mg/ml in sterile water. Erythromycin was prepared at a concentration of 5 mg/ml in ethanol. Stock solutions were aliquoted and kept frozen at -80°. Each aliquot was rapidly thawed and only used once.
Antibiotic susceptibility testing. Susceptibility tests were performed using a broth microdilution assay according to NCCLS reference methods (28) in a final volume of 100 µl, using cation-adjusted Mueller-Hinton broth (CAMHB) (Difco). The culture medium was supplemented with 2% NaCl when testing ß-lactam antibiotics against S. aureus isolates. The MICs of the drugs for streptococci were determined in CAMHB supplemented with 2.5% lysed horse blood (Remel).
Antibiotics were prepared at a concentration equivalent to two times the highest desired final concentration. Antibiotics were then diluted directly in the 96-well microtiter plates by serial twofold dilution by using a multichannel pipette. Microtiter plates were incubated for 24 h at 35°C and were read using a microtiter plate reader (Molecular Devices) at 650 nm as well as by visual observation using a microtiter plate reading mirror. Inoculum effect studies were carried out by performing susceptibility testing using both agar dilution and broth microdilution methods, as previously described (28), with modification of the starting inoculum.
Affinity for PBPs: preparation of bacterial membranes. Membrane-based PBP assays were used for measurement of RWJ-54428 affinity to MRSA PBP 2a and E. hirae PBP 5. MRSA strain S. aureus 67-0 was grown at 35°C in tryptic soy broth (Difco) containing 5 µg of nafcillin/ml, and the cell membrane fraction was extracted as described below. E. hirae R40 was grown at 35°C in brain heart infusion (Difco) without antibiotic. In both cases, exponentially growing cells were harvested by centrifugation, washed, and stored at -80°C. Frozen cells were rapidly thawed, and initial cellular lysis was carried out in 50 mM Tris buffer (pH 7.5) containing lysostaphin (100 µg/ml) or lysozyme (500 µg/ml), 100 mM NaCl, 5 mM MgCl2, 1 mM phenylmethylsulfonyl fluoride, and 20 µg of DNase I and RNase A per ml at 35°C for 1 h before cells were mechanically disrupted using a French pressure cell. Unbroken cells were removed by low-speed centrifugation. Membranes were separated by differential ultracentrifugation from the cell extract and suspended in 10 mM Tris-HCl (pH 7) to a final concentration of 10 mg of protein/ml (4, 11).
Competition assays. PBPs were labeled using a biotinylated ampicillin (BIO-AMP) according to the method described by Dargis and Malouin (7). The reporter molecule, BIO-AMP, was also prepared as previously described (7). To selectively label PBP 2a from staphylococcal membrane preparations, samples were first incubated with 100 µg of clavulanic acid/ml for 10 min at 35°C to saturate high-affinity PBPs (PBPs 1, 2, and 3). The extremely low affinity of clavulanate for MRSA PBP 2a relative to that for the other PBPs was previously reported by Chambers and Sachdeva (4). The relative binding affinity of ß-lactams for PBP 2a was then assayed, in a competition assay, by adding increasing concentrations of the test compound to aliquots of the reaction mixture containing 20 µg of membrane preparation for 15 min at 35°C prior to the addition of BIO-AMP (20 µM final concentration) for an additional 15 min. Clavulanic acid was omitted in experiments determining the binding of the test compounds to any other PBPs. Samples were then boiled for 4 min in electrophoretic loading buffer containing sodium dodecyl sulfate (SDS), and proteins were separated by electrophoresis on an SDS-polyacrylamide discontinuous gel system (5% stacking and 8% separating gels). After electrophoresis, proteins were transferred onto nitrocellulose membranes. Electrophoretic PBP profiles were detected on blots by using an ECL chemiluminescence reagent system (Amersham), on the basis of the interaction of BIO-AMP-PBP complexes and an avidin-peroxidase conjugate (Bio-Rad Laboratories) (7). The concentration of the test ß-lactam needed to block 50% of the subsequent binding of BIO-AMP to each PBP of interest (50% inhibitory concentration [IC50]) was determined by scanning the PBP profiles obtained on an ECL hyperfilm (Amersham) or on a chemiluminescence screen using a Molecular Imager (Bio-Rad). In some cases, the binding of the test ß-lactam to the entire PBP set was evaluated by measuring the reduction of the overall chemiluminescence signal compared to that of the control PBP profile obtained in the absence of the test ß-lactam and was expressed as the percentage of inhibition of BIO-AMP binding to PBPs.
Whole-cell assays. PBP competition assays for MSSA and S. pneumoniae strains were performed with intact bacterial cells. For each concentration of test compound, an aliquot of freshly grown cells (equivalent to 1 ml of a bacterial suspension with an A600 of 0.4) was substituted for the cell membrane preparation in the competition assay described above. After the 15-min incubation period, the labeling reaction was quickly stopped by the addition of ice-cold unlabeled penicillin G (1 mg/ml) and cells were collected by centrifugation. Cells were suspended in a lysis buffer (described above) for 15 min at 37°C, and cell debris were collected by centrifugation in a tabletop Avanti centrifuge (Beckman) with the F3606 rotor at maximum speed for 20 min. Supernatants were removed, electrophoretic loading buffer was added to the membrane pellet, and samples were boiled for 4 min before separation of proteins on SDS-polyacrylamide gel electrophoresis and transfer onto nitrocellulose membrane as described above.
ß-Lactamase preparation. Extracellular ß-lactamase was purified from S. aureus PC1 producing type A ß-lactamase. Staphylococcal ß-lactamase extract was prepared by the method described by Kernodle et al. (20-21).
ß-Lactamase stability assay. Analysis of the kinetics of hydrolysis by purified PC1 ß-lactamase was performed as follows: a concentration of 100 µM antibiotic was used in 0.1 M sodium phosphate buffer, pH 7.0. Reactions were followed at wavelengths which corresponded to the maximal change in absorbance between the unhydrolyzed substrate and the hydrolyzed product for each ß-lactam, as follows: cephaloridine (254 nm), cefamandole (269 nm), cefazolin (272 nm), cefaclor (264 nm), penicillin G (232 nm), ampicillin (235 nm), nitrocefin (486 nm), and RWJ-54428 (290 nm). Selection of the wavelength to study the ß-lactamase stability of RWJ-54428 was based on the results of validation assays, which demonstrated the disappearance of RWJ-54428 following the addition of sodium hydroxide. The assay was performed in a 1-cm quartz cuvette at room temperature, using a Perkin-Elmer Lambda Bio UV/VIS spectrometer. Only the initial linear part of the curve was used in calculations of the ß-lactamase hydrolysis rate. Results were expressed as the relative rate of hydrolysis (RRH), and cephaloridine hydrolysis was set at 100%. The ß-lactamase stability assay was repeated three times using three different preparations of enzymes. The results presented below in Table 4 are representative of one of the assays. The compound ranking order was similar in each of the assays performed.
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TABLE 4. RRH of RWJ-54428 and other ß-lactam antibiotics by the purified PC1 ß-lactamase of S. aureus
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FIG. 2. PBP competition assay demonstrating the affinity of RWJ-54428 toward PBP 2a of MRSA strain 67-0 in comparison to that with imipenem.
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FIG. 3. Whole-cell PBP competition assay demonstrating the affinity of RWJ-54428 toward the PBPs of MSSA strain ATCC 29213 in comparison to that with imipenem.
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TABLE 1. Binding affinity of RWJ-54428 and known ß-lactam antibiotics toward a selection of PBPs from ß-lactam-susceptible and -resistant gram-positive bacteria
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RWJ-54428 has high affinity for multiple PBP targets from both ß-lactam-susceptible and -resistant gram-positive strains. RWJ-54428 showed IC50 values comparable to those of other traditional ß-lactams, such as nafcillin for MSSA, imipenem for E. hirae, and penicillin G for S. pneumoniae, in the sense that the low MIC could be associated with the IC50 for one or more PBPs. As opposed to that seen against MRSA PBP 2a, imipenem was very potent and showed very low IC50 values for MSSA PBPs (Table 1 and Fig. 3). Table 2 compares the binding of RWJ-54428 to that of penicillin G for PBPs from penicillin-susceptible, penicillin-intermediate, and penicillin-resistant isolates of S. pneumoniae. By measuring the residual chemiluminescence signal of BIO-AMP in the presence of RWJ-54428 compared to that measured in the control PBP profiles, it was shown that the overall binding of RWJ-54428 for S. pneumoniae PBPs was equivalent to or surpassed that of penicillin G in PBP competition assays (Table 2).
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TABLE 2. Affinity of RWJ-54428 toward PBPs of selected S. pneumoniae strains compared with that of penicillin G (Pen G)
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TABLE 3. Susceptibility of staphylococci and enterococci producing ß-lactamases to RWJ-54428 and other ß-lactam antibiotics
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In vitro inoculum effect. The effect of inoculum size on the in vitro activity of RWJ-54428 against various strains of S. aureus was determined by using broth microdilution and agar dilution methods. In the agar dilution assays (Table 5), there was no significant increase in the MIC of RWJ-54428 for strains with inocula ranging from 5 x 104 to 5 x 107 CFU/spot. Only twofold variations in susceptibility to RWJ-54428 were observed for the S. aureus strains tested, including ß-lactamase-positive strains. In contrast, the activity of penicillin G, which is highly susceptible to degradation by staphylococcal ß-lactamases, against ß-lactamase-positive strains was dramatically reduced (by 16- to 128-fold) with a 100-fold larger inoculum. There was a two- to eightfold increase in MICs of cefamandole and cefaclor when tested against the ß-lactamase-positive MSSA strains at an inoculum 1,000-fold larger (i.e., >107 CFU/spot).
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TABLE 5. Effect of inoculum size on activity of RWJ-54428 against MRSA and MSSA strains with various types and levels of production of ß-lactamase, as determined using the agar dilution assay
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108 CFU/ml) the NCCLS recommended inoculum (data not shown). The eightfold increase in MIC was observed in a ß-lactamase-negative strain, indicating that ß-lactamase does not contribute to this observation. In contrast, strong inoculum effects (2- to 256-fold increases in MICs) were noted for commercially available antibiotics such as cefamandole, cefaclor, cefazolin, cefotaxime, ampicillin, penicillin G, and vancomycin with inocula 50 times the NCCLS recommended inoculum size (data not shown). In studies conducted with RWJ-54428 in the broth microdilution assay, samples from sub-MIC wells at higher inocula were streaked onto antibiotic-free TSA plates and incubated aerobically at 35°C for 24 h. When colonies were isolated, their susceptibility to RWJ-54428 was determined. There was no change in susceptibility for these isolated colonies compared to the parent strains.
Selection of resistance. Attempts to select and obtain S. aureus isolates resistant to RWJ-54428 were unsuccessful. In the instances where growth was observed and colonies were picked from the selective media, endpoint susceptibility tests showed that these isolates were as susceptible as the parental strains to RWJ-54428, with MICs varying by no more than twofold. This was the case whether the test strain used in these frequency-of-resistance studies was MRSA, MSSA, ß-lactamase-positive or -negative, or when the inoculum was as large as 109 CFU/ml.
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Although we demonstrated the potent in vitro activity against a large number of clinical isolates of methicillin-resistant and methicillin-susceptible staphylococci (S. aureus and coagulase-negative staphylococci), enterococci, and pneumococci (3), we needed to verify that the high-affinity PBP 2a/PBP 5 pharmacophore of RWJ-54428 did not impede binding to other crucial PBP targets found in ß-lactam-susceptible organisms. The affinity of RWJ-54428 for PBPs of S. aureus, E. hirae, and S. pneumoniae was high. RWJ-54428 binds well to both resistant and susceptible PBPs from staphylococci, enterococci, and pneumococci. The low MICs of RWJ-54428 for these ß-lactam-susceptible gram-positive bacteria were associated with low IC50 values for one or more PBPs. Studies with penicillin-susceptible, -intermediate, and -resistant pneumococci demonstrated that RWJ-54428 also has high affinity for penicillin-resistant and -susceptible PBPs in pneumococci.
The ß-lactamase stability of RWJ-54428 was demonstrated by comparing the susceptibilities of various strains of S. aureus producing several types and amounts of ß-lactamases (A, B, C, and D). The stability of RWJ-54428 to staphylococcal ß-lactamase was further substantiated with biochemical studies. Partly purified PC1 enzyme was used to determine the RRHs for RWJ-54428 and several other ß-lactam antibiotics. The RRH of RWJ-54428 by type A staphylococcal ß-lactamase was low compared to those of other ß-lactams, indicating increased stability of this new cephalosporin to this enzyme. RRHs for reference compounds were in accordance with previously published data: penicillin G RRH, 1,869; ampicillin RRH, 675; cefamandole RRH, 6.4; cefazolin RRH, 30.6; and nitrocefin RRH, 2,034 (41).
Significant inoculum effects with S. aureus have been reported for antibiotics susceptible to hydrolysis by ß-lactamases, but not for ß-lactamase-stable ß-lactam antibiotics (34). In agar dilution assays and microdilution broth assays, increasing inoculum size did not significantly reduce the activity of RWJ-54428 against the MSSA and MRSA strains studied, regardless of the production of ß-lactamase or the type of enzyme produced by these strains (type A, B, C, or D).
Numerous efforts to isolate spontaneous resistant mutants of S. aureus by passage on media containing various concentrations of RWJ-54428 were unsuccessful. In these studies, the production of ß-lactamase in various strains of S. aureus did not provide more opportunities to select resistance to RWJ-54428. Both the high affinity of RWJ-54428 for multiple PBPs and its stability to staphylococcal ß-lactamases are attributes that may reduce the rate of isolation of resistance to this new cephalosporin in S. aureus.
In summary, RWJ-54428 is a new cephalosporin with potent activity against staphylococci, including MRSA. The enhanced activity of RWJ-54428 against MRSA is associated with high affinity for PBP 2a, the primary determinant of methicillin resistance in Staphylococcus spp. (6). This corroborates the potent antistaphylococcal activity of RWJ-54428 that was previously reported against a large population of strains demonstrating MIC90s of 0.5, 2, and 2 µg/ml against MSSA, MRSA, and MR coagulase-negative staphylococci, respectively (3). RWJ-54428 also binds to multiple PBPs from gram-positive bacteria. These properties combined with a stability to staphylococcal ß-lactamase render RWJ-54428 a potent agent for resistant gram-positive strains and species of clinical importance.
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FIG. 1. RWJ-54428 (MC-02,479) chemical structure.
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The work described herein was conducted as part of a research collaboration with the R.W. Johnson Pharmaceutical Institute.
Present address: Université de Sherbrooke, Faculté des sciences, département de biologie and CEVDM, Sherbrooke, Québec, Canada J1K 2R1. ![]()
Present address: Ulysses Pharmaceuticals, Eastman, Québec, Canada J0E 1P0. ![]()
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