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Antimicrobial Agents and Chemotherapy, July 2003, p. 2327-2329, Vol. 47, No. 7
0066-4804/03/$08.00+0 DOI: 10.1128/AAC.47.7.2327-2329.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Inhibitory Activities of Quinolones against DNA Gyrase of Chlamydia pneumoniae
Satoshi Ameyama,* Yuko Shinmura, and Masahiro Takahata
Research Laboratories, Toyama Chemical Co., Ltd., Toyama 930-8508, Japan,
Received 5 December 2002/
Returned for modification 7 January 2003/
Accepted 15 April 2003

ABSTRACT
The
gyrA and
gyrB genes of
Chlamydia pneumoniae TW-183 were
cloned, and their proteins were purified by use of a fusion
system with a maltose-binding protein. The 50% inhibitory concentrations
of garenoxacin, sparfloxacin, moxifloxacin, gatifloxacin, and
levofloxacin were 10.1, 47.5, 39.6, 64.2, and 156.9 µg/ml,
respectively, and the MICs against
C. pneumoniae TW-183 were
0.008, 0.016, 0.063, 0.125, and 0.25 µg/ml, respectively.

TEXT
Chlamydia pneumoniae is a frequent cause of community-acquired
respiratory tract infections including pneumonia and bronchitis
in adults and children (
2,
11,
13). Quinolones have been recommended
for the treatment of pneumonia caused by
C. pneumoniae (
1).
The targets of quinolones are considered to be DNA gyrase and
topoisomerase IV (
7,
10), which are essential enzymes for controlling
the topological state of DNA in DNA replication and transcription.
DNA gyrase is composed of subunits A and B, encoded by the
gyrA and
gyrB genes, respectively. DNA gyrase catalyzes ATP-dependent
negative supercoiling of DNA.
Quinolones developed recently, such as garenoxacin (T-3811, BMS-284756), moxifloxacin, and gatifloxacin, possess a wide antimicrobial spectrum (3, 8, 9, 18) and also have a potent activity against C. pneumoniae (5, 6, 14, 15, 16, 17). These are expected to be useful in the treatment of infectious diseases caused by C. pneumoniae. In this study, we cloned C. pneumoniae DNA gyrase genes, and examined the activities of quinolones against the recombinant proteins to investigate the relation between the 50% inhibitory concentrations (IC50) and the activities against C. pneumoniae.
The gyrA and gyrB genes in C. pneumoniae CWL029 are denoted gyrA_1 and gyrA_2 and gyrB_1 and gyrB_2, respectively, in the GenBank (accession no.: AE001612 for gyrA_1 and gyrB_1 and AE001653 for gyrA_2 and gyrB_2). We first cloned the gyrA_1 and gyrB_1 genes from C. pneumoniae TW-183 and separately purified the encoded proteins (GyrA_1 and GyrB_1, respectively) by the use of a fusion system with a maltose-binding protein (MBP) and then examined enzymatic properties. For cloning gyrA_1 and gyrB_1 into the pT7Blue T vector, the C. pneumoniae TW-183 genome was isolated from chlamydial elementary bodies (104 inclusion-forming units). PCR amplification of gyrA_1 and gyrB_1 was performed with the CPGA-1-CPGA-2 and CPGB-1-CPGB-2 primer sets, respectively (Table 1). DNA was amplified for 35 cycles, in which the conditions were 1 min at 94°C, 1 min at 55°C, and 2 min at 72°C. Amplified PCR products for CPGA-1-CPGA-2 and CPGB-1-CPGB-2 primer pairs were about 2.5 and 2.4 kbp, respectively, and cloned genes were sequenced. Two sets of oligonucleotide primers (CPGA-3-CPGA-4 and CPGB-3-CPGB-4; Table 1) were designed for amplification of gyrA_1 and gyrB_1 genes and their subsequent insertion into BamHI and HindIII sites and BamHI and PstI sites, respectively, in the pMAL-c2 vector. The proteins obtained by fusion of MBP with GyrA_1 and GyrB_1 (GyrA_1-MBP and GyrB_1-MBP, respectively) were produced by the Escherichia coli DH5
overexpression system and were purified according to the method of Tanaka et al. (19). The molecular masses of GyrA_1-MBP and GyrB_1-MBP by sodium dodecyl sulfate-polyacrylamide gel electrophoresis were approximately 137 and 134 kDa, respectively. Reconstituted proteins showed ATP- and Mg2+-dependent supercoiling activity when GyrA_1-MBP and GyrB_1-MBP were used simultaneously (Fig. 1) but not decatenation (data not shown). Accordingly, it was suggested that gyrA_1 and gyrB_1 were the gyrA and gyrB genes, respectively.
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TABLE 1. Oligonucleotide primers used to amplify the DNA gyrase genes from C. pneumoniae TW-183 for protein purification
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The following quinolones were employed in this study: garenoxacin,
sparfloxacin, moxifloxacin, gatifloxacin, and levofloxacin.
Garenoxacin, gatifloxacin, and moxifloxacin were synthesized
in Research Laboratories, Toyama Chemical Co., Ltd., Toyama,
Japan. Sparfloxacin and levofloxacin were purchased from their
respective manufacturers. Susceptibility testing of
C. pneumoniae TW-183 was performed by using a cell culture with HEp-2 cells
grown in 24-well plates according to the method of the Japan
Society of Chemotherapy (
12). The IC
50s of quinolones in a DNA-supercoiling
assay were determined by using recombinant GyrA and GyrB of
C. pneumoniae TW-183. The supercoiling activity of DNA gyrase
was measured in a 20-µl solution containing 2 U of reconstituted
GyrA-MBP and GyrB-MBP, drug solution, 50 mM Tris-HCl (pH 8.0),
5 mM MgCl
2, 20 mM KCl, 5 mM dithiothreitol, 5 mM ATP, 350 mM
potassium glutamate, 5 µg of bovine serum albumin, and
0.05 µg of relaxed pBR322 plasmid DNA. After incubation
at 37°C for 1 h, reactions were terminated by the addition
of a dye mixture, and then the products were analyzed by electrophoresis
in 1% agarose. Gels were stained with ethidium bromide following
electrophoresis. One unit of supercoiling activity was defined
as the amount of GyrA-MBP and GyrB-MBP proteins that produces
half-maximal supercoiling of 0.05 µg of relaxed pBR322
DNA in 1 h at 37°C, and the specific activities of GyrA-MBP
and GyrB-MBP were determined as 1.7
x 10
5 and 6.9
x 10
3 U per
mg, respectively. The DNA-supercoiling assay in the presence
of an excess of one of the subunits is shown in Fig.
1. The
IC
50 for DNA gyrase supercoiling activity was defined as the
concentration of drug that reduces the intensity of the most-supercoiled
DNA band by one-half in the presence of enzyme proteins just
sufficient for full supercoiling of the relaxed substrate DNA.
The IC
50s expressed are the averages of three trials.
In the supercoiling inhibition assay, the effects of a range of garenoxacin and levofloxacin concentrations were determined (Fig. 2). The MICs for C. pneumoniae TW-183 and the IC50s for the DNA-supercoiling activity in three trials are shown in Table 2. The MICs of garenoxacin, sparfloxacin, moxifloxacin, gatifloxacin, and levofloxacin against C. pneumoniae TW-183 were 0.008, 0.016, 0.063, 0.125, and 0.25 µg/ml, respectively, and the mean IC50s were 10.1, 47.5, 39.6, 64.2, and 156.9 µg/ml, respectively. The MICs also roughly correlated with the IC50s (r2 = 0.91).
The IC
50 of sparfloxacin (47.5 µg/ml) was higher than
that of moxifloxacin (39.6 µg/ml), although the MIC of
sparfloxacin (0.016 µg/ml) was fourfold lower than that
of moxifloxacin (0.063 µg/ml). These results might indicate
that there are other factors that affect the antichlamydial
activity of sparfloxacin, such as good permeability on the HEp-2
cell membrane and chlamydial outer membrane, less-efficient
efflux in HEp-2 and chlamydia cells, and preferential action
through topoisomerase IV rather than DNA gyrase. It has been
reported that sparfloxacin preferentially inhibits DNA gyrase
rather than topoisomerase IV in
Chlamydia trachomatis (
4). However,
it has not been clarified whether the primary target of quinolones
is DNA gyrase or topoisomerase IV in
C. pneumoniae. More work
will need to be done to resolve the enzymatic characterization
of proteins encoded by the
gyrA_
2 and
gyrB_
2 genes (putative
topoisomerase IV genes) of
C. pneumoniae and to characterize
the mutants selected with quinolones.
In summary, we obtained the recombinant DNA gyrase proteins of C. pneumoniae TW-183 and the IC50s against supercoiling activity of DNA gyrase roughly correlated with their MICs for the quinolones tested. Garenoxacin had the most-potent inhibitory activity against DNA gyrase.
Nucleotide sequence accession number.
The products of PCR amplification of gyrA_1 and gyrB_1 were entered into GenBank under accession no. AB103388.

ACKNOWLEDGMENTS
Preliminary sequence data were obtained from the Chlamydia Genomes
website (
http://chlamydia-www.berkeley.edu:4231/). We thank
to Brian Coffey for reviewing the manuscript.

FOOTNOTES
* Corresponding author. Mailing address: Research Laboratories, Toyama Chemical Co., Ltd., 2-4-1, Shimookui, Toyama 930-8508, Japan. Phone: 81-76-431-8268. Fax: 81-76-431-8208. E-mail:
SATOSHI_AMEYAMA{at}toyama-chemical.co.jp.


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Antimicrobial Agents and Chemotherapy, July 2003, p. 2327-2329, Vol. 47, No. 7
0066-4804/03/$08.00+0 DOI: 10.1128/AAC.47.7.2327-2329.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
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