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Antimicrobial Agents and Chemotherapy, September 2003, p. 2974-2977, Vol. 47, No. 9
0066-4804/03/$08.00+0 DOI: 10.1128/AAC.47.9.2974-2977.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Activity of Daptomycin against Recent North American Isolates of Streptococcus pneumoniae
M. I. Restrepo,1 J. A. Velez,1,
M. L. McElmeel,2 C. G. Whitney,3 and J. H. Jorgensen1,2*
Departments of Medicine,1
Pathology, University of Texas Health Science Center, San Antonio, Texas 78229,2
Division of Bacterial and Mycotic Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia 303333
Received 26 March 2003/
Returned for modification 24 May 2003/
Accepted 23 June 2003

ABSTRACT
Daptomycin MICs at which 50% of isolates were inhibited (MIC
50s)
and MIC
90s determined by the NCCLS broth microdilution method
were both 0.25 µg/ml (range, 0.06 to 2 µg/ml) for
350 pneumococcal isolates. MICs determined by E test strips
on commercially prepared Mueller-Hinton sheep blood agars with
different calcium contents were 2 to 3 dilutions higher than
those determined by strips that contained daptomycin plus calcium.
Daptomycin zone diameters varied little on the same media.

INTRODUCTION
The increasing resistance of
Streptococcus pneumoniae over the
past decade to several different antibiotic classes has limited
the therapeutic choices for treatment of severe, invasive pneumococcal
infections (
5,
8,
9,
25,
28,
29). Macrolide resistance has increased
steadily in the United States (
16,
29), with some resulting
clinical failures (
18; D. M. Musher, M. E. Dowell, V. D. Shortridge,
R. K. Flamm, J. H. Jorgensen, P. Le Magueres, and K. L. Krause,
Letter, N. Engl. J. Med.
346:630-631, 2002). The emergence of
fluoroquinolone resistance in some areas has raised concern
for treatment of serious infections in the future (
6,
14,
15)
and has also resulted in therapeutic failures (
7,
15). In particular,
fluoroquinolones have been recommended as agents with predictable
activity against otherwise-drug-resistant pneumococci, especially
for patients with underlying risk factors for severe infections
(
4,
13). The use of vancomycin to treat pneumococcal infections
other than meningitis has not been encouraged, in part due to
concerns about increasing vancomycin resistance in other organisms
(
13). Thus, newer agents that can provide predictable activity
against multidrug-resistant pneumococcal strains in severely
ill patients are needed.
Daptomycin is a semisynthetic lipopeptide antibiotic that appears to possess a unique mechanism of action: it disrupts the cell membranes of gram-positive bacteria by causing the loss of membrane potential (1). Because of very good reported activity against a variety of gram-positive bacteria both recently (3, 11, 23, 26) and when undergoing initial development (2, 17, 24), daptomycin is currently under development for several clinical indications and is administered once daily by the intravenous route (27). The optimal activity of daptomycin requires physiological levels of calcium ions (
50 µg/ml), including levels in culture media used to perform susceptibility tests (3, 10, 12). This in vitro study assessed the activity of daptomycin against 350 recent North American surveillance isolates of S. pneumoniae, including selected highly resistant strains. In addition, selected isolates were examined by the E test gradient diffusion method and the NCCLS disk diffusion procedure for determination of daptomycin susceptibilities.
The 350 pneumococcal isolates examined in this study included 200 with resistance mechanisms affecting macrolides, lincosamides, streptogramins, fluoroquinolones, and beta-lactams. An additional 150 fully susceptible isolates were selected randomly from among more than 9,000 invasive pneumococcal isolates recovered and characterized during the Centers for Disease Control and Prevention's Active Bacterial Core Surveillance, part of the Emerging Infections Program, conducted from 1998 through 2000. The isolates were recovered from patients in seven different surveillance sites, which represented a total survey population of greater than 17 million people. These strains had been tested earlier against a battery of 15 antimicrobial agents representing all clinically relevant drug classes. The statistical power of the sample allowed detection of a resistance rate of approximately 0.2% (95% confidence interval, 0 to 1% resistance).
In addition to being tested with daptomycin, each isolate was tested with linezolid, quinupristin-dalfopristin, penicillin, cefotaxime, erythromycin, clindamycin, and levofloxacin. Daptomycin reagent grade powder was kindly provided by Cubist Pharmaceuticals. Diagnostic grade powders of the other agents were either obtained from their manufacturers or purchased from Sigma Chemical Company, St. Louis, Mo. The test medium for the NCCLS broth microdilution procedure (20) was cation-adjusted Mueller-Hinton broth (Difco formulation; Becton Dickinson [BD], Cockeysville, Md.) supplemented with 3% lysed horse blood and, in addition, supplemented to contain a final calcium concentration of 44 µg/ml. Inocula of the test organisms were prepared from colonies grown on sheep blood agar plates incubated for 20 to 24 h in 5% CO2. Colonies were suspended in 0.9% saline to obtain a suspension equivalent to the turbidity of a 0.5 McFarland standard and further diluted 1:10 in 0.9% saline within 15 min. This provided a final inoculum density of approximately 5 x 105 CFU/ml in the wells of the microdilution panels following inoculation. Colony counts of positive control wells were performed periodically to verify the desired inoculum concentrations. The microdilution panels were incubated at 35°C in ambient air for 20 to 24 h prior to visual determination of MICs.
MICs for a subset of 50 selected strains were determined with specially prepared daptomycin E strips (prepared by AB Biodisk, Solna, Sweden, and provided by Cubist), one lot of which contained added calcium as well as the daptomycin to establish a calcium and daptomycin concentration gradient in the agar. The daptomycin concentration range for both E test formulations was 0.016 to 256 µg/ml. E test strips were applied to the surfaces of 150-mm-diameter Mueller-Hinton sheep blood agar plates (purchased from BD or Remel, Lenexa, Kans.). E strips containing vancomycin as a control drug were included on each plate. Plates were inoculated with a 0.5 McFarland density organism suspension prepared in 0.9% saline as described above. Plates were incubated at 35°C in 5% CO2 for 20 to 24 h prior to determination of MICs. The MIC was defined by the intersection of the growth ellipse margin with the E test strip when reflected light at an oblique angle was used to examine the plates. Because the E test strips are marked in 1/2 log2 concentration values, it was possible to record MICs in smaller than the usual twofold increments. In such instances in this study, E test MICs were rounded to the next higher log2 MICs for purposes of comparison with the reference broth microdilution MICs.
Disk diffusion tests with 30-µg daptomycin disks (prepared by BD and provided by Cubist) were performed on the same 50 selected isolates according to the methods recommended by the NCCLS (21) with the same 150-mm Mueller-Hinton sheep blood agar plates (BD and Remel). Chemical assays of the calcium levels of the Mueller-Hinton agar lots used in the study were kindly provided by Cubist. Disk tests with vancomycin as the control drug were performed on each isolate. Plates were inoculated with an organism suspension equivalent to a 0.5 McFarland standard prepared in 0.9% saline as described above. Plates were incubated at 35°C in 5% CO2 for 20 to 24 h prior to measurement of zone diameters.
S. pneumoniae ATCC 49619 was tested initially and with each day's MIC and disk diffusion tests for quality control purposes. MICs and zone diameter values for the control drug, vancomycin, were always within the NCCLS-specified range (22) throughout the study.
The daptomycin MIC at which 50% of the isolates were inhibited (MIC50) and MIC90 were both 0.25 µg/ml for the overall strain collection based on MICs determined by the NCCLS broth microdilution test method and calcium-supplemented lysed horse blood broth (Table 1). Linezolid was active against all strains tested, although three isolates were resistant to quinupristin-dalfopristin and 32 isolates were resistant to levofloxacin (Table 1). The daptomycin MICs for the resistant strain collection were slightly higher than those for the fully susceptible strains for unclear reasons.
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TABLE 1. Susceptibility of the S. pneumoniae isolate collection to daptomycin and the comparative agents by the NCCLS broth microdilution method with calcium-supplemented Mueller-Hinton lysed horse blood broth as the test medium
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The calcium content of the test media included in this study
varied widely. Although the target value of calcium for the
reference broth microdilution method was 50 µg/ml, the
final medium contained a measured concentration of 44 µg/ml.
One of the agar lots had the desired content of 50 µg/ml,
although three lots from a different manufacturer contained
only 11 to 14 µg/ml (Tables
2 and
3). The differing calcium
contents of the Mueller-Hinton sheep blood agars examined in
this study had a significant effect on the daptomycin MICs by
the E test method (Table
2). The daptomycin E strips without
calcium provided the best correlation with MICs determined by
the NCCLS broth microdilution method when applied to the BD
Mueller-Hinton agar (calcium content, 50 µg/ml), i.e.,
90.9% essential agreement of MICs. E strips that contained calcium
plus daptomycin yielded MICs fourfold or more lower when used
with BD Mueller-Hinton agar, which resulted in an essential
agreement of only 63.1% with the reference broth microdilution
MICs. Conversely, the daptomycin E strips that included calcium
provided the best correlation with MICs determined by the NCCLS
broth microdilution method when applied to the Remel Mueller-Hinton
agar that was largely deficient in calcium (11 to 14 µg/ml),
i.e., 96% essential agreement of MICs. Daptomycin MICs with
the non-calcium-supplemented E strips provided much higher MICs
when the Remel Mueller-Hinton agar was used, resulting in 0%
essential agreement. Of note, the daptomycin MICs generated
by the broth microdilution reference method and both E test
formulations and all Mueller-Hinton agar lots were always within
the 4-dilution approved NCCLS range (0.06 to 0.5 µg/ml)
with
S. pneumoniae ATCC 49619 (
22).
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TABLE 2. Comparison of daptomycin E test MICs and NCCLS broth microdilution MICs according to the Mueller-Hinton agar test medium and E test formulation
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TABLE 3. Comparison of daptomycin zone diameters according to the Mueller-Hinton agar brand and its calcium content
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The calcium content also affected daptomycin zone diameters
when determined by the NCCLS disk diffusion test, but to only
a modest degree (

2 mm). Since zone size interpretive criteria
for daptomycin have not yet been established, it is not possible
to determine if the smaller zones developed on the Mueller-Hinton
agar that contained suboptimal amounts of calcium would result
in interpretive errors. Nevertheless, daptomycin disk zones
seemed less affected by the calcium content of the media than
MICs generated by E tests on the same medium lots. Routine quality
control testing of
S. pneumoniae ATCC 49619 did not reveal any
deficiencies in the performance of the Mueller-Hinton sheep
blood agar lots.
While earlier studies that examined the activity of daptomycin against pneumococci focused only on penicillin-susceptible and nonsusceptible strains (2, 3, 23, 24, 26), we assessed its activity against strains with resistance to several other drug classes (i.e., macrolides, lincosamides, fluoroquinolones, and quinupristin-dalfopristin), Based on our findings and those of others (2, 3, 10, 11, 17, 23, 24, 26) it appears that daptomycin should be considered, along with vancomycin and linezolid, an agent with predictable activity against contemporary pneumococci.
The calcium content of susceptibility test media has been shown previously to affect daptomycin susceptibility results (3, 10, 26) due to the calcium-dependent nature of the drug's binding to its molecular target (19). The Mueller-Hinton sheep blood agars examined in this study had a significant effect on the daptomycin MICs determined by the E test method. Thus, a laboratory would need to carefully match the E test formulation to the calcium content of their test media. Alternatively, commercial medium manufacturers could strive to provide media with approximately the target concentration of calcium so that the standard daptomycin E test strips could be used with confidence. For unclear reasons, the calcium content of the agars did not seem to result in a large variance in zone diameters by the standard NCCLS disk test. Unfortunately, routine quality control testing with the NCCLS-designated strain S. pneumoniae ATCC 49619 did not reveal any deficiencies in the various Mueller-Hinton agar lots. Diagnostic product manufacturers should strive to achieve standardization of test reagents and media so that this promising new drug can be tested reliably by clinical microbiology laboratories if clinical studies lead to the eventual approval of daptomycin for clinical use.

ACKNOWLEDGMENTS
This study was supported in part by a grant from Cubist Pharmaceuticals,
Lexington, Mass.

FOOTNOTES
* Corresponding author. Mailing address: Department of Pathology, University of Texas Health Science Center, 7703 Floyd Curl Dr., San Antonio, TX 78229. Phone: (210) 567-4088. Fax: (210) 567-2367. E-mail:
jorgensen{at}uthscsa.edu.

Present address: Instituto de Ciencias de la Salud, Medellin, Colombia. 

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Antimicrobial Agents and Chemotherapy, September 2003, p. 2974-2977, Vol. 47, No. 9
0066-4804/03/$08.00+0 DOI: 10.1128/AAC.47.9.2974-2977.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.