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Antimicrobial Agents and Chemotherapy, October 2004, p. 4020-4022, Vol. 48, No. 10
0066-4804/04/$08.00+0 DOI: 10.1128/AAC.48.10.4020-4022.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Alterations of Penicillin-Binding Proteins 1A, 2X, and 2B in Streptococcus pneumoniae Isolates for Which Amoxicillin MICs Are Higher than Penicillin MICs
K. Kosowska,1 M. R. Jacobs,2 S. Bajaksouzian,2 L. Koeth,3* and P. C. Appelbaum1
Hershey Medical Center, Hershey, Pennsylvania,1
Case Western Reserve University, Cleveland,2
Laboratory Specialists, Inc., Westlake, Ohio3
Received 10 February 2004/
Returned for modification 7 May 2004/
Accepted 20 June 2004

ABSTRACT
Penicillin-binding proteins (PBPs) of 15 selected penicillin-
and amoxicillin-resistant
Streptococcus pneumoniae isolates
(MICs of 2 to 8 and 8 to 16 µg/ml, respectively) were
studied. In addition to typical changes in PBPs 1A and 2X, these
strains had 10 unique changes in PBP 2B, including a
618A-G
substitution, which may be the key alteration associated with
amoxicillin resistance.

TEXT
The efficacy of ß-lactam antibiotics has been compromised
by rapid increases in the prevalence of penicillin-nonsusceptible
Streptococcus pneumoniae strains (
1). This is the result of
altered penicillin-binding proteins (PBPs) with decreased antibiotic
affinities (
2-
4,
12,
15,
17). Pneumococci have, however, generally
remained susceptible to amoxicillin as a result of the favorable
pharmacokinetic properties of this agent (
6,
13,
14). A few
reports have documented isolates that are resistant to both
amoxicillin and penicillin, with, in some instances, the unusual
feature of amoxicillin MICs (4 to 16 µg/ml) being higher
than penicillin MICs (2 to 8 µg/ml) (
9,
10,
15). The purpose
of this study was to characterize the nucleotide sequences of
regions encoding the penicillin-binding domains of
pbp1a,
pbp2b,
and
pbp2x from representative strains with this unusual pattern.
To accomplish this purpose, 15 such isolates of S. pneumoniae were selected from the 1998 to 2000 Alexander Network and Augmentin XR 2000 surveillance studies and the MICs for these isolates were confirmed by broth microdilution (Trek Diagnostic Systems, Inc., Cleveland, Ohio) (16). Ten other penicillin-resistant but amoxicillin-susceptible strains were also selected for comparative purposes.
Analysis of nucleotide and deduced amino acid sequences encoding penicillin-binding domains of PBPs was performed by PCR using a standard protocol (15), with the addition of primers to amplify an additional fragment of the pbp1a gene, 1AAMPF (5' ACCTACTCACAACTGGGATGGATG) and 1AAMPR (5' TGGTTGTGCTGGTTGAGGATTCTG), which correspond to positions 869 and 892 and are complementary to positions 2134 and 2157, respectively. The PCR products produced were a 1.2-kb fragment of the pbp1a gene, a 2-kb segment of the pbp2x gene, and a 1.4-kb segment of the pbp2b gene. PCR products were purified from primers and excess nucleotides with a QIAquick PCR purification kit (QIAGEN, Valencia, Calif.) and directly sequenced with a CEQ8000 genetic analysis system (Beckman Coulter, Fullerton, Calif.). DNA sequences were aligned with ClustalW (18) and compared to nucleotide and deduced amino acid sequences from penicillin-susceptible S. pneumoniae R6. Mutants with nucleotide changes in a particular gene were sequenced twice forward and twice in the reverse direction on PCR products amplified in independent reactions. Strains were also serotyped with pneumococcal antisera (Statens Serum Institute, Copenhagen, Denmark), and DNA fingerprinting was determined by pulsed-field gel electrophoresis (PFGE) after digestion of DNA with SmaI (8).
The surveillance studies from which the strains were selected included 16,141 isolates of S. pneumoniae from 29 countries. The results for penicillin/amoxicillin susceptibility were 64.9/93.6% susceptible, 13.9/3.2% intermediate, and 21.1/3.2% resistant. The amoxicillin MICs for a total of 483 isolates (3.0%) of 8 to 16 µg/ml that were 1 or more dilutions higher than penicillin MICs were predominantly from the United States (381 of 4,928 isolates; 7.7%), Spain (29 of 537 isolates; 5.4%), and France (19 of 821 isolates; 2.3%).
Penicillin and amoxicillin MICs for 23 of the 25 isolates were confirmed to be within 1 doubling dilution of initial MICs, while the amoxicillin MICs for two strains were 2 doubling dilutions lower. The origins, serotypes, and susceptibility patterns of the 15 penicillin- and amoxicillin-resistant isolates are shown in Table 1. PFGE profiles showed 14 unique patterns, with isolates 8 and 31 sharing a common profile.
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TABLE 1. Origins, serotypes, overall susceptibility patterns (initial MICs), and PFGE profiles of 15 S. pneumoniae isolates with 10 common substitutions in PBP 2B (grouped according to strains with similar MIC patterns)a
|
PBP analyses showed that all but two of the 25 strains had T
371A
or S substitutions in the STMK motif of PBP 1A. There were 14
strains with a T
371S substitution in PBP 1A, the penicillin
MICs for 12 of which were lower than the amoxicillin MICs. Within
the
337STMK
340 motif of PBP 2X, there were six strains with
an M
339F substitution, the penicillin MICs for all of which
were lower than the amoxicillin MICs. Another substitution within
the
337STMK
340 motif of PBP 2X was T
338S or A, which occurred
in all but one of the strains tested. All 25 strains had a T
445A
substitution in the
442SSNT
445 motif of PBP 2B (Table
2).
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TABLE 2. Amino acid alterations of the three conserved motifs of PBP 1A, 2X, and 2B in S. pneumoniae R6 and 25 study strains
|
Based on reports that the 590- to 641-amino-acid region of PBP
2B, which surrounds the
614KTG
616 drug binding site motif, is
associated with amoxicillin resistance (
10,
12), all of our
strains were also analyzed for alterations in this region. Strains
were categorized based on the number of amino acid substitutions
surrounding the
614KTG
616 motif of PBP 2B. In addition to changes
present in amoxicillin-susceptible, penicillin-resistant, strains,
a pattern of 10 substitutions (A
591S, G
596P, N
605D, L
608T, A
618G,
D
624G, Q
627E, T
629N, S
639T, and D
640E) was found to be unique
to the 15 amoxicillin-resistant isolates, with 6 substitutions
being specific for this group: G
596P, N
605D, L
608T, A
618G, S
639T,
and D
640E. One of these unique alterations, A
618G, is in close
proximity to the active
614KTG
616 motif.
Although the 15 amoxicillin-resistant isolates shared this unique set of PBP 2B substitutions, they were not clonal, belonging to 5 serotypes (6B, 14, 19A, 19F, and 23F) and 14 PFGE patterns, as well as having variable susceptibility to macrolides, clindamycin, and tetracycline (Table 1).
Most of the PBP changes found in the 25-strain studies were typical of those previously described, such as single or double substitutions in the 337STMK340 motif of PBP 2X, M339F substitution in PBP 2X, and T338S or T338A substitution in PBP 2X. These substitutions have been described as predominating in strains with intermediate penicillin resistance (2, 5, 15). However, changes in the region 590 to 641 of PBP 2B were unique to the 15 amoxicillin-resistant strains, and transformation experiments have shown that amoxicillin-resistant transformants had acquired multiple PBP changes and that acquisition of these 10 substitutions in PBP 2B by transformants was the key factor associated with amoxicillin resistance (10).
While amoxicillin-resistant strains are currently rare, accounting for only 3.0% of isolates from recent worldwide surveillance studies, and their clinical significance is not clear, the prevalence of these isolates should continue to be monitored. Current formulations of amoxicillin and amoxicillin/clavulanate are active against pneumococci for which amoxicillin MICs are
2 µg/ml, and newer formulations, such as amoxicillin/clavulanate suspension (90/6.4 mg/kg of body weight/day) and pharmacokinetically enhanced amoxicillin/clavulanate (2,000/125 mg twice a day) have been developed to address isolates for which amoxicillin MICs are
4 µg/ml (7, 11). Further increases in amoxicillin dosing regimens may be required to overcome the resistance described in this report should the prevalence of these strains increase.

ACKNOWLEDGMENTS
This work was supported by a grant from GlaxoSmithKline.
We are grateful for the excellent technical assistance provided by Anne Windau.

FOOTNOTES
* Corresponding author. Mailing address: Laboratory Specialists, Inc., 1651 A Crossings Parkway, Westlake, OH 44145. Phone: (440) 835-4458. Fax: (440) 835-5786. E-mail:
amdlmk{at}aol.com.


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Antimicrobial Agents and Chemotherapy, October 2004, p. 4020-4022, Vol. 48, No. 10
0066-4804/04/$08.00+0 DOI: 10.1128/AAC.48.10.4020-4022.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
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