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Antimicrobial Agents and Chemotherapy, June 2004, p. 1960-1967, Vol. 48, No. 6
0066-4804/04/$08.00+0 DOI: 10.1128/AAC.48.6.1960-1967.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Nosocomial Spread of Ceftazidime-Resistant Klebsiella pneumoniae Strains Producing a Novel Class A ß-Lactamase, GES-3, in a Neonatal Intensive Care Unit in Japan
Jun-ichi Wachino,1,2 Yohei Doi,1 Kunikazu Yamane,1 Naohiro Shibata,1 Tetsuya Yagi,1 Takako Kubota,3 Hideo Ito,2 and Yoshichika Arakawa1*
Department of Bacterial Pathogenesis and Infection Control, National Institute of Infectious Diseases, Tokyo,1
Central Clinical Laboratory, Kagoshima Municipal Hospital, Kagoshima,3
Program in Radiological and Medical Laboratory Sciences, Nagoya University Graduate School of Medicine, Nagoya, Japan2
Received 8 August 2003/
Returned for modification 16 November 2003/
Accepted 12 December 2003

ABSTRACT
Klebsiella pneumoniae strain KG525, which showed high-level
resistance to broad-spectrum cephalosporins, was isolated from
the neonatal intensive care unit (NICU) of a Japanese hospital
in March 2002. The ceftazidime resistance of strain KG525 was
transferable to
Escherichia coli CSH-2 by conjugation. Cloning
and sequence analysis revealed that production of a novel extended-spectrum
class A ß-lactamase (pI 7.0), designated GES-3, which
had two amino acid substitutions of M62T and E104K on the basis
of the sequence of GES-1, was responsible for resistance in
strain KG525 and its transconjugant. The
blaGES-3 gene was located
as the first gene cassette in a class 1 integron that also contained
an
aacA1-orfG fused gene cassette and one unique cassette that
has not been described in other class 1 integrons and ended
with a truncated 3' conserved segment by insertion of IS
26.
Another five ceftazidime-resistant
K. pneumoniae strains, strains
KG914, KG1116, KG545, KG502, and KG827, which were isolated
from different neonates during a 1-year period in the same NICU
where strain KG525 had been isolated, were also positive for
GES-type ß-lactamase genes by PCR. Pulsed-field gel
electrophoresis and enterobacterial repetitive intergenic consensus-PCR
analyses displayed genetic relatedness among the six
K. pneumoniae strains. Southern hybridization analysis with a GES-type ß-lactamase
gene-specific probe showed that the locations of
blaGES were
multiple and diverse among the six strains. These findings suggest
that within the NICU setting genetically related
K. pneumoniae strains carrying the
blaGES gene were ambushed with genetic
rearrangements that caused the multiplication and translocation
of the
blaGES gene.

INTRODUCTION
Resistance to ß-lactam antibiotics mainly depends
on the production of ß-lactamases. To date, a large
variety of ß-lactamases which were classified by their
amino acid sequences and functional substrate specificity profiles
in various gram-negative bacilli such as
Pseudomonas spp. and
members of the family
Enterobacteriaceae have been documented
(
6). Since the late 1980s, extended-spectrum ß-lactamases
(ESBLs) derived from TEM- and SHV-type penicillinases capable
of hydrolyzing the oxymino-cephalosporins have been spreading
globally, mainly in the
Enterobacteriaceae, including
Klebsiella pneumoniae and
Escherichia coli (
5,
23,
29). Moreover, various
non-TEM-, non-SHV-type class A ß-lactamases exhibiting
extended-spectrum activities, including CTX-M-type (
13,
31,
38,
39,
41), SFO-type (
18), VEB-type (
12,
20,
25), and GES-type
(
10,
11,
19,
24,
28,
37) ß-lactamases, have also been
reported in various gram-negative bacilli. Among the GES-type
ß-lactamases, GES-1, which was found to be produced
by
K. pneumoniae ORI-1, identified from a child transferred
from French Guiana to France in 1998, was the first report of
the GES-type class A ß-lactamase (
24); and GES-1-producing
K. pneumoniae strains have caused nosocomial infections in Portugal
(
9). IBC-1 was identified in an
Enterobacter cloacae clinical
isolate from Greece in 1999 (
11), and IBC-1-producing
E. cloacae has also been reported to cause nosocomial infections in a neonatal
intensive care unit (NICU) (
17). GES-2, which displayed more
extended-spectrum activity against imipenem compared with that
of GES-1, was reported in
Pseudomonas aeruginosa from South
Africa (
28) in 2000, and GES-2 producers also caused a nosocomial
infection (
27). All three genes,
blaGES-1,
blaGES-2, and
blaIBC-1,
were found to be located as a gene cassette within similar class
1 integrons.
Recently, six clinical isolates of K. pneumoniae showing high-level resistance to various broad-spectrum cephalosporins, including ceftazidime, were identified from the NICU of a Japanese hospital, and conventional PCR analyses for TEM-derived ESBLs and CTX-M enzymes failed to specify their genetic determinants. In the present study, therefore, we characterized the molecular mechanism underlying the multiple-cephalosporin resistance among these six strains, as well as the organizations of their genetic environments.

MATERIALS AND METHODS
Bacterial strains and plasmids.
The strains and plasmids used in this study are listed in Table
1. Six
K. pneumoniae clinical strains had been isolated from
neonates over 1 year, from September 2001 to August 2002, and
were stored in the clinical microbiology laboratory of the hospital
until this study. Biochemical phenotypic identification of these
strains was carried out by the analytical profile index procedure
(API 20E system; bioMerieux, Marcy l'Etoile, France). A preliminary
double-disk synergy test was carried out with disks containing
ceftazidime and amoxicillin-clavulanate. Bacteria were grown
in Luria-Bertani (LB) broth supplemented with appropriate antibiotics,
unless specified otherwise.
Antibiotic susceptibility testing.
The following antibiotics were obtained from the indicated sources:
ampicillin, amoxicillin, and cefminox, Meiji Seika Kaisha, Ltd.,
Tokyo, Japan; piperacillin, Toyama Chemical Co., Ltd., Toyama,
Japan; cephaloridine and moxalactam, Shionogi & Co., Ltd.,
Osaka, Japan; cefmetazole and chloramphenicol, Sankyo Co., Ltd.,
Tokyo, Japan; cefotaxime and cefpirome, Aventis Pharma, Ltd.,
Tokyo, Japan; ceftazidime and clavulanic acid, GlaxoSmithKline
K. K., Tokyo, Japan; sulbactam, Pfizer Pharmaceutical Inc.,
Tokyo, Japan; tazobactam, Taiho Pharmaceutical Co., Ltd., Tokyo,
Japan; cefepime, Bristol Pharmaceuticals K. K., Tokyo, Japan;
aztreonam, Eizai Co., Ltd., Tokyo, Japan; imipenem, Banyu Pharmaceutical
Co., Ltd., Tokyo Japan; and rifampin, Daiichi Pharamaceutical
Co., Ltd., Tokyo, Japan. The MICs of the ß-lactams
were determined by the agar dilution method, according to the
recommendations of National Committee for Clinical Laboratory
Standards document M7-A5 (
21).
E. coli ATCC 25922 and ATCC 35218
were purchased from the American Type Culture Collection (ATCC)
and served as control strains in the antimicrobial susceptibility
testing.
PCR amplification.
To amplify the broad-spectrum ß-lactamase genes from the six clinical strains, PCR analyses were performed with sets of primers specific for various ß-lactamase genes found in Japanincluding the TEM-derived extended-spectrum ß-lactamase (39); CMY-2-, MOX-1-, and DHA-1-type ßlactamases (8, 40, 41); and CTX-M-1-, CTX-M-2-, CTX-M-9-, IMP-1-, IMP-2-, and VIM-2-type ß-lactamases (13, 26, 30, 31, 33, 39)under the conditions described elsewhere (33). Detection of the SHV-type ß-lactamase gene was not performed because most clinical K. pneumoniae strains carry the LEN-1 and/or SHV-1 ß-lactamase gene on their chromosomes (1, 7). In order to detect the GES-type ß-lactamase gene, an 827-bp internal fragment of the gene was amplified with primers GES-A (5'-CTT CAT TCA CGC ACT ATT AC-3') and GES-B (5'-TAA CTT GAC CGA CAG AGG-3') under the conditions described above.
Conjugal transfer of ß-lactam resistance.
Conjugal transfer of the ceftazidime resistance of K. pneumoniae KG525 to a recipient E. coli strain, strain CSH-2 (F metB, resistant to nalidixic acid and rifampin), was performed by the filter mating method. Transconjugants were selected on LB agar plates containing ceftazidime (2 µg/ml), rifampin (100 µg/ml), and nalidixic acid (50 µg/ml).
Cloning experiment and DNA sequencing.
Basic recombinant DNA techniques were performed as described by Sambrook et al. (32). Total DNA of K. pneumoniae KG525 was extracted and digested with BamHI. The resultant fragments were ligated into cloning vector pBCSK+ (Stratagene, La Jolla, Calif.) restricted with the same enzyme. Transformants were selected on LB agar plates containing chloramphenicol (30 µg/ml) and ampicillin (50 µg/ml) or ceftazidime (2 µg/ml). The nucleotide sequence of the cloned fragment was determined with BigDye terminator cycle Sequencing Ready Reaction kits and an ABI 3100 DNA sequencer (Applied Biosystems, Foster City, Calif.) by using custom sequencing primers.
Site-directed mutagenesis for comparison of GES-3 with IBC-1.
PCR-based site-directed mutagenesis of the blaGES-3 gene was performed with the LA PCR In Vitro Mutagenesis kit (TAKARA Bio Inc., Ohtsu, Japan). In brief, the entire blaGES-3 gene and its promoter region were amplified by PCR and cloned into plasmid pCR2.1 with the TA cloning kit (Invitrogen, NV, Leek, The Netherlands). One plasmid, pTAGES3, was selected after it was confirmed that it contained no amplification error and was then digested with EcoRI. The resultant fragment was recloned into pBCSK+. The resultant plasmid, pGES3, with an insert carrying the blaGES-3 gene and its promoter region was used to introduce a single nucleotide mutation (C to T) at nucleotide position 167, which leads to an amino acid substitution (T to M) at position 62 in GES-3, resulting in the conversion of the gene product from GES-3 to IBC-1 expressed under the same promoter.
Pulsed-field gel electrophoresis (PFGE) and enterobacterial repetitive intergenic consensus (ERIC)-PCR analyses.
Total DNA was prepared from six K. pneumoniae strains (34) and digested overnight with XbaI (New England Biolabs, Beverly, Mass.). The digested DNA was electrophoresed with a CHEF-DRII Drive Module (Bio-Rad Laboratories, Hercules, Calif.) under the following conditions: pulses ranging from 10 to 40 s at 6 V/cm for 20 h at 16°C. Six K. pneumoniae strains were also typed with the primer ERIC-2 (5'-AAG TAA GTG ACT GGG GTG AGC G-3'). The PCR was carried out under the conditions described elsewhere (36).
Southern hybridization.
Large plasmids were prepared from six K. pneumoniae strains by the procedure described by Kado and Liu (16). The chromosomal DNA was extracted from each isolate by the method of Stauffer et al. (35). Both plasmid and chromosomal DNA preparations were separately subjected to Southern hybridization experiments. The 827-bp DNA probes were amplified by a PCR with primers 5'-CTT CAT TCA CGC ACT ATT AC-3' and 5'-TAA CTT GAC CGA CAG AGG-3'. The PCR amplicons were labeled with digoxigenin (DIG) by a random priming labeling method with the PCR DIG detection system, as recommended by the manufacturer (Roche Diagnostics, Tokyo, Japan). Southern hybridization was performed by the protocol of the manufacturer (Roche Diagnostics).
Purification of GES-3 ß-lactamase.
To overproduce GES-3 ß-lactamase in E. coli, the blaGES-3 gene was amplified by using two primers, primer GES-F (5'-CAT ATG CGC TTC ATT CAC GCA CTA TTA CTG-3'), which was designed to add an NdeI linker (underlined), and primer GES-R (5'-GTC GAC CTA TTT GTC CGT GCT CAG GAT GAG-3'), which was designed to add an SalI linker (underlined), and DNA polymerase (Expand High Fidelity PCR System; Roche Diagnostics), according to the instructions of the manufacturers. The resulting products were cloned into plasmid pCR2.1 with the TA cloning kit (Invitrogen, NV) and subjected to confirmatory sequencing. One plasmid with no amplification error was selected and was partially double digested with NdeI and SalI and then subcloned into pET-29a(+) (Novagen, Madison, Wis.), which had been digested with the same enzymes. The expression vector constructed, named pET-GES3, was introduced into E. coli BL21(DE3) pLysS (Novagen). E. coli BL21(DE3) pLysS carrying plasmid pET-GES3 was cultured in 1 liter of LB broth containing kanamycin (50 µg/ml). Isopropyl-ß-D-thiogalactopyranoside (final concentration, 1 mM) was added when the culture reached an A600 of 0.6, and the culture was incubated for an additional 2 h. The cells were harvested by centrifugation and were suspended in 5 ml of 20 mM bis-Tris buffer (pH 6.5). The suspension was passed through a French pressure cell twice and was then centrifuged at 100,000 x g for 1 h at 4°C. The supernatant was used for subsequent chromatographic purification. Size-exclusion chromatography was performed on a HiLoad 16/60 Superdex 200 prep-grade column (Pharmacia Biotech, Uppsala, Sweden) preequilibrated with 20 mM bis-Tris buffer (pH 6.5). Fractions containing ß-lactamase activity were collected and applied to an anion-exchange Hitrap Q HP column with the same buffer. ß-Lactamase activity was recovered in the flowthrough and was dialyzed against 20 mM Tris-HCl buffer (pH 8.0) overnight at 4°C. This partially purified enzyme was loaded onto a Hitrap Q HP column (Pharmacia Biotech) preequilibrated with the same buffer and eluted with a linear gradient of NaCl. Fractions presenting high levels of activity were pooled and dialyzed against 50 mM phosphate buffer (pH 7.0).
Isoelectric focusing (IEF).
Fifty milliliters of the bacterial culture was centrifuged, and the cell pellet was suspended in 5 ml of distilled water. A crude periplasmic preparation containing ß-lactamase was obtained by freezing-thawing the bacterial suspension three times, followed by ultracentrifugation (40,000 x g) for 1 h. The supernatant was condensed to 1/10 volume with an Ultrafree-15 Centrifugal Filter Device (Millipore Corporation, Bedford, Mass.). To determine the isoelectric point (pI), 5 µl of the condensed supernatant containing ß-lactamase was loaded onto an Ampholine PAG plate (pH 3.5 to 9.5; Pharmacia Biotech) with a Multiphor II electrophoresis system (Pharmacia Biotech). The pI of the ß-lactamase was measured by staining the gel with a 0.05% solution of nitrocefin. Purified GES-3 ß-lactamase was also electrophoresed on the Ampholine PAG plate and stained with Coomassie blue.
Nucleotide sequence accession number.
The nucleotide sequence data reported in this paper are available in the GenBank nucleotide database under accession number AB113580.

RESULTS
Characteristics of six K. pneumoniae clinical isolates.
The susceptibilities of the six isolates to ß-lactams
are presented in Table
2. All isolates were resistant to piperacillin,
ceftazidime, and aztreonam. The MICs of cefotaxime, cefmetazole,
cefepime, and imipenem for the isolates were variable. Despite
the addition of clavulanic acid, these isolates kept their high-level
resistance to ceftazidime (MICs,

128 µg/ml).
This observation was consistent with the negative results of
the double-disk synergy test with two disks containing ceftazidime
and amoxicillin-clavulanate, respectively. Metallo-ß-lactamase
production was not detected by using a thiol compound (
2). PCR
analyses performed preliminarily to detect broad-spectrum ß-lactamase
genes including TEM derivatives, CTX-M-1, CTX-M-2, CTX-M-9,
MOX-1 (CMY-9), CMY-2, DHA-1, IMP-1, IMP-2, and VIM-2, all of
which had already been identified in Japan, failed to give positive
results.
Transfer and cloning of ß-lactamase genes.
The ceftazidime resistance determinant of representative strain
K. pneumoniae KG525 was successfully transferred to a recipient
strain,
E. coli CSH-2; and this finding indicated that the genetic
determinant was located on a transferable plasmid. Two ceftazidimeresistant
E. coli clones, each of which harbored a plasmid containing
BamHI fragment inserts of approximately 6.7 and 11.6 kb, respectively,
were obtained as a result of the cloning experiment. These two
recombinant plasmids contained the same 864-bp open reading
frame (ORF) encoding a putative ß-lactamase which
had conserved structural features of the active site of Ambler
class A ß-lactamases. The deduced amino acid sequence
of the ß-lactamase showed an amino acid substitution
of M62T (a point mutation of T to C at nucleotide position 167)
compared with the amino acid sequences of GES-1 (
24), GES-2,
and IBC-1, as well as an additional E104K substitution in comparison
with the amino acid sequences of GES-1 and GES-2 (Fig.
1). Moreover,
an N170G substitution was found in GES-3 compared with the amino
acid sequence of GES-2, although the G residue at amino acid
position 170 was conserved in IBC-1 and GES-1, as well as in
GES-3. Therefore, we named this novel class A ß-lactamase
GES-3, although GES-1 is based on "Guiana extended spectrum"
(
24).
Antibiotic susceptibilities.
The MICs of the ß-lactams for parent strain
K. pneumoniae KG525, transconjugant
E. coli CSH-2(pKGC525), and transformant
E. coli XL1-Blue(pKGB525) are listed in Table
3. Parental strain
K. pneumoniae KG525 was resistant to most ß-lactams
except the cephamycins and carbapenems. The tranconjugant and
transformant were resistant to ceftazidime, and the MICs of
the other ß-lactams were lower for the tranconjugant
and the transformant than for the parent strain. The changes
in the MICs of cefotaxime and ceftazidime for parent strain
KG525 were apparently observed by the addition of ß-lactamase
inhibitors, such as clavulanic acid, sulbactam, and tazobactam,
while decreases in the MICs of amoxicillin, ampicillin, and
piperacillin, as well as cefotaxime and ceftazidime, were observed
for the
E. coli tranconjugant and transformant in the presence
of the inhibitors.
Genetic environment of blaGES-3.
Two distinct BamHI fragments carrying the
blaGES-3 gene were
cloned; their sizes were approximately 6.7 and 11.6 kb, respectively,
and pKGB525 had the 6.7-kb fragment. Sequencing analysis of
the entire insert on pKGB525 revealed that the
blaGES-3 gene
was located as a gene cassette within a class 1 integron structure,
as was observed in the other GES-type ß-lactamase
genes,
blaGES-1,
blaGES-2, and
blaIBC-1 (Fig.
2). The 59-base
element downstream of the
blaGES-3 gene was made up of 110 bp
and was different from that of the truncated 59-base element
of
blaGES-1 on pTK1 (GenBank accession number
AF156486), but
shared it 99% nucleotide identity with those of
blaGES-2 on
pLAP-1 (GenBank accession number
AF326355) and
blaIBC-1 on pHT9-2
(GenBank accession number
AF208529).
The second gene cassette adjacent to the
blaGES-3 gene was a
fused
aacA1-orfG gene cassette. The results of the disk diffusion
test indicated that the presence of an
aacA1 component, which
encodes aminoglycoside-6'-
N-acetyltransferase, conferred kanamycin
resistance to the transformant
E. coli XL1-Blue(pKGB525) (data
not shown). The nucleotide sequence of this fused gene cassette
shared 100% identity with that in a class 1 integron on plasmid
pCMXR1 (GenBank accession number
AB061794). The function of
the product encoded by
orfG has not been characterized in detail.
The third gene cassette is 327 bp and was named
orfA. The
orfA gene was suggested to be a gene cassette by recognition of the
features typical of these elements: (i) the presence at the
cassette boundaries of 7-bp core site sequences that completely
fit the consensus sequence and (ii) the presence of a 59-base
element of 78 bp downstream of the
orfA gene. However, no remarkable
similarity between the hypothetical protein encoded by
orfA and any other known protein sequences was detected in a search
performed with the BLAST program. The 3' conserved segment of
this integron showed a characteristic organization. The
qacE
1 gene was truncated at nucleotide position 114 by the insertion
sequence IS
26. In the region downstream of IS
26, an IS
6100 element
and two ORFs of unknown function, i.e.,
orf5 and
orf6, were
found. The nucleotide sequence of the 1.4-kb region containing
IS
6100,
orf5, and
orf6 was identical to that seen downstream
of the
sulI gene of the class 1 integron in the chromosomal
multidrug resistance locus of
Salmonella enterica subsp.
enterica serovar Typhimurium (GenBank accession number
AF261825). Sequencing
analysis of pKGM525 carrying the second
blaGES-3 gene on an
11.6-kb fragment was also done, and the
blaGES-3 gene was also
found in a class 1 integron structure with the same gene cassette
configuration as in pKGB525. The nucleotide sequence of the
region from
intI1 to IS
26 was the same as that found in pKGB525
carrying a 6.7-kb BamHI fragment.
Construction of IBC-1 by site-directed mutagenesis.
Only one amino acid substitution, M62T, was found between the sequences of GES-3 and IBC-1 (Fig. 1). Therefore, to examine whether this amino acid substitution affects the MICs of ßlactams for the E. coli clones producing each enzyme, we constructed plasmid pIBC1, which encodes the IBC-1 enzyme under the same promoter as that for GES-3, by site-directed mutagenesis of the blaGES-3 gene within the parental plasmid, pGES3. However, this single substitution did not markedly influence the MICs for the E. coli clones (data not shown).
PCR detection and genotypic comparison.
The remaining five nonrepetitive ceftazidime-resistant K. pneumoniae strains, strains KG914, KG1116, KG545, KG502, and KG827, were all found to be blaGES positive by PCR. The results of PFGE analysis of all six isolates are shown in Fig. 3. Their fingerprinting patterns were very similar but in some cases were distinct. We examined the fingerprinting patterns from 48.5 to 194 kb in detail under other conditions (data not shown). Overall, there were from three to seven band differences among the six strains examined. The ERIC-PCR patterns amplified with the ERIC-2 primer were indistinguishable from one another (data not shown). Taken together with the fact that these isolates were collected over a 1-year period, we speculate that they were genetically related and had probably spread via nosocomial transmission of an endemic clone.
Plasmid profiles and Southern hybridization.
The plasmid profiles of the six
blaGES-positive strains showed
the presence of a large plasmid of approximately similar size
in five of the six strains (Fig.
4A), while some of them possessed
additional plasmids which were smaller and more diverse in size.
Hybridization analyses with the probe specific for the GES-type
ßlactamase genes, including
blaIBC-1, revealed that
the location of this gene varied among the strains tested. Hybridization
signals for large plasmids were detected for strains KG914,
KG1116, and KG502 (Fig.
4B). Hybridization signals for both
plasmids and chromosomal positions were observed for KG525.
One of the hybridized plasmids from each of KG914, KG1116, and
KG525 were similar in size. A single hybridization signal corresponding
to the chromosomal position was detected for each of the strains
KG545 and KG827 (Fig.
4C).
pIs of ß-lactamases.
The pI value of the purified GES-3 enzyme was determined to
be 7.0 (Fig.
5A). IEF of crude extracts from six GES-type ß-lactamase-producing
clinical strains revealed two bands with pIs of 7.6 and 7.0
(Fig.
5B). The band with pI 7.0 was also detected in a GES-3-producing
E. coli transformant which harbored the
blaGES-3 gene of
K. pneumoniae strain KG525. The band with a pI of 7.6 corresponds
to the chromosomally encoded LEN-1 (
1) or SHV-type penicillinase
of
K. pneumoniae.

DISCUSSION
Considerable differences in the levels of resistance to various
cephalosporins were observed among the
E. coli clones producing
GES-1, GES-2, and IBC-1, although the level of production of
each enzyme may differ in individual clones. For instance, the
MIC of ceftazidime for an
E. coli clone producing GES-1 was
128 µg/ml (
24), while that for an
E. coli clone producing
GES-2 was 8 µg/ml (
28). The single amino acid substitution
in the

loop observed between GES-1 and GES-2, G170N, may well
contribute to the difference in the substrate specificities
of these enzymes. On the other hand, the MIC of ceftazidime
for an
E. coli clone producing IBC-1 was >256 µg/ml
(
11). The only amino acid substitution observed between GES-1
and IBC-1, E104K, might well also be attributed to a higher
level of resistance of IBC-1 than that of GES-1 to ceftazidime,
cefotaxime, and aztreonam (
11,
19,
24). The MIC of ceftazidime
for an
E. coli clone producing GES-3 was 128 µg/ml, and
GES-3 has a single M62T substitution compared with the sequence
of IBC-1, which also confers high-level resistance to ceftazidime
in an
E. coli clone (MIC, >256 µg/ml). We investigated
whether this one amino acid substitution observed between GES-3
and IBC-1 affects the MICs for
E. coli clones expressing each
enzyme. However, this substitution did not result in significant
changes in the MICs for the
E. coli clones. This finding suggests
that the amino acid substitution at position 62 may not play
a crucial role in the extended substrate specificity of GES-3
against ceftazidime and that those at positions 104 and 170
would be crucial for extended-spectrum enzyme activity.
In the present study, we also isolated a novel GES-type class A enzyme, GES-3, from K. pneumoniae strains which caused neonatal nosocomial infections in 2002 in Japan. Sequence analysis of the genetic environments of the blaGES-3 genes on pKGB525 carrying a 6.7-kb insert and pKGM525 carrying a 11.6-kb insert revealed that the blaGES-3 genes were located as gene cassettes in class 1 integrons, as observed in other GES-type ß-lactamase genes, including blaIBC-1 (Fig. 2). Integrons are very sophisticated site-specific recombination systems that capture various gene cassettes, including antibiotic resistance genes, between their 5' and 3' conserved segments (14, 15, 22). The gene cassettes for the GES-type enzymes with a very close phylogenetic relationship might have originated as a single clone and then disseminated worldwide with the help of class 1 integrons possessing very similar genetic organizations. These integrons are mediated by self-transmissible plasmids with a wide host range. Since very similar GES enzymes have so far been found in French Guiana, Greece, South Africa, Portugal, and Japan, these GES-type ß-lactamase-producing strains might have been scattered globally by the recent extensive international travel or dissemination of humans, foods, and animals.
In the present study, we analyzed genetic relatedness using PFGE and ERIC-PCR of all six GES-type ß-lactamase-producing K. pneumoniae strains isolated in a NICU over a 1-year period. Since the fingerprinting patterns obtained by PFGE and ERIC-PCR were very similar, these isolates were suggested to belong to the same genetic lineage that caused the nosocomial spread. The minor differences in the fingerprinting patterns obtained by PFGE might be due to the occurrence of genetic rearrangements over the course of the nosocomial spread. Interestingly, the results of Southern hybridization suggested that the locations of the blaGES genes were multiple and diverse among the six strains studied. By consideration of the results of PFGE, ERIC-PCR, and Southern hybridization, it can be speculated that an endemic strain containing the blaGES genes might have spread within the NICU setting over the 1-year period and might have undergone genetic rearrangements, including translocation and multiplication of the blaGES gene.
The presence of multiple blaGES-3 genes in strain KG525 is probably the result of these genetic rearrangements. Translocation and multiplication of the blaGES gene might be facilitated by mediation of a site-specific recombination system of an integron or a transposon. A similar example of multiple locations of the same antibiotic resistance gene has been reported by Yagi et al. (38). In their study, a single clinical E. coli isolate was found to carry three distinguishable Toho-1-like ß-lactamase genes, which were later identified as blaCTX-M-2, by their restriction digestion patterns on the chromosome. These multiple locations of the same ß-lactamase gene would be beneficial to bacteria, since they increase the chance of amino acid substitutions necessary for extension of the substrate profiles of ß-lactamases as well as the multicopy effect of gene expression. Bradford et al. (3) reported that point mutations leading to ESBLs (ESBLs TEM-1 to TEM-10 and TEM-12) occurred on the plasmids of a single K. pneumoniae clinical isolate. A notable finding presented in that report was the distinct hydrolyzing activity between TEM-10 and TEM-12. TEM-10 had hydrolyzing activity against ceftazidime, while TEM-12 also hydrolyzed cefotaxime and aztreonam, in addition to ceftazidime. A variety of susceptibility profiles for cephamycins were also observed among the six K. pneumoniae strains in the present study. For instance, strains KG914, KG1116, and KG525 were susceptible to cefmetazole (MICs, 16 µg/ml), whereas strains KG545, KG502, and KG827 were resistant to this agent (MICs,
128 µg/ml). In particular, strain KG502 showed high-level resistance to other cephamycins, such as cefoxitin (MIC, >128 µg/ml), cefminox (MIC, >128 µg/ml), and moxalactam (MIC, 128 µg/ml). An evolutionary event similar to that observed in the TEM enzymes (3) might have occurred in these K. pneumoniae strains to give them further resistance to a broad range of antibiotics. The MIC of imipenem for strain KG502 was 8 µg/ml, and this might be due to the hyperproduction of some ß-lactamase with an extended substrate specificity as well as the loss of some outer membrane protein, as reported by Bradford et al. (4). Further molecular characterization of the cephamycin resistance observed in strain KG502 will be undertaken in the next study.

ACKNOWLEDGMENTS
We are grateful to Leonidas S. Tzouvelekis, Laboratory of Bacteriology,
Hellenic Pasteur Institute, Athens, Greece, for kindly providing
E. cloacae HT9-producing IBC-1 and
E. coli DH5

containing pHT9-2
and to Kumiko Kai for technical help.
This work was supported by grants H12-Shinko-19 and H12-Shinko-20 from the Ministry of Health, Labor and Welfare of Japan.

FOOTNOTES
* Corresponding author. Mailing address: Department of Bacterial Pathogenesis and Infection Control, National Institute of Infectious Diseases, 4-7-1 Gakuen, Musashi-Murayama, Tokyo 208-0011, Japan. Phone: 81-42-561-0771, ext. 500. Fax: 81-42-561-7173. E-mail:
yarakawa{at}nih.go.jp.


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Antimicrobial Agents and Chemotherapy, June 2004, p. 1960-1967, Vol. 48, No. 6
0066-4804/04/$08.00+0 DOI: 10.1128/AAC.48.6.1960-1967.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
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