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Antimicrobial Agents and Chemotherapy, July 2005, p. 2914-2920, Vol. 49, No. 7
0066-4804/05/$08.00+0 doi:10.1128/AAC.49.7.2914-2920.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Grupo de Investigación de Enzimología, Departamento de Bioquímica y Biología Molecular A, Facultad de Biología, Universidad de Murcia, E-30100 Espinardo,1 Servicio de Análisis Clínicos,2 Servicio de Microbiología, Hospital Universitario Virgen de la Arrixaca, Murcia, Spain3
Received 7 October 2004/ Returned for modification 7 December 2004/ Accepted 6 March 2005
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The treatment of choice for S. maltophilia infection is trimethoprim-sulfamethoxazole (TMP-SMZ; cotrimoxazole), alone or in combination with ticarcillin-clavulanate (25, 32, 33). TMP-SMZ is bacteriostatic for most isolates; hence, high doses (12 to 15 mg/kg of body weight/day based on TMP) are usually recommended. Both drugs block folic acid metabolism in bacteria and are much more active together than either agent is alone. Sulfonamides are competitive inhibitors of the incorporation of p-aminobenzoic acid, while TMP is an inhibitor of the dihydrofolate reductase (DHFR; 5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase; EC 1.5.1.3) reaction. It is well known that DHFR catalyzes the NADPH-dependent reduction of 7,8-dihydrofolate (DHF) to 5,6,7,8-tetrahydrofolate (THF), which acts as a coenzyme for a number of 1-carbon transfer reactions, including those involved in nucleotide biosynthesis. Consequently, inhibition of DHFR leads to the disruption of DNA synthesis; this is the basis of the antibiotic action of DHFR inhibitors, the antifolates (13). Although TMP is currently used for the treatment of S. maltophilia infections, the mechanism by which this compound inhibits S. maltophilia DHFR has not been well characterized. Therefore, in this study we purified the DHFR from this microorganism for the first time, and we present data on its inhibition by classical (methotrexate [MTX]) and nonclassical (TMP) antifolate compounds.
Recent studies have presented data on a number of biological activities of tea polyphenols, or catechins (14, 23, 26). It has been reported that tea catechins have antibacterial activity against various pathogenic bacteria (15, 16, 23, 37). There are three main varieties of tea, green, black, and oolong, which are all derived from the leaves of the Camellia sinensis plant. The difference between the teas results from their processing. Green tea is prepared from unfermented leaves, the leaves of oolong tea are partially fermented, and black tea is fully fermented. This difference in processing results in more of the polyphenols being destroyed in the black teas. Thus, green tea contains roughly 30% to 40% polyphenols, while black tea contains only 3% to 10%. Green tea, therefore, seems to have more of the beneficial effects mentioned above, but black teas still retain some of the benefits. Epigallocatechin gallate (EGCG) is the most abundant of these tea catechins (one 240-ml cup of brewed green tea contains up to 200 mg EGCG), and many health-related benefits, including antioxidant, antibiotic, and antiviral activities, have been attributed to this compound (26). Despite the great efforts made during the last 2 decades to understand the biological activity of tea, the exact mechanism(s) of action is not well defined. Therefore, deciphering the molecular mechanism by which green tea or EGCG exerts its antibacterial effects could be important because it may result in improved opportunities for the treatment of different bacterial infections. In attempting to explain the range of responses of S. maltophilia to tea phenols observed in our laboratory, we were struck by the structural similarity of EGCG to several inhibitors of DHFR, in particular, to the drugs MTX and TMP (Fig. 1). In order to probe the hypothesis that EGCG could act as an antifolate compound, we studied the inhibition of S. maltophilia DHFR by this tea compound and compared it with inhibition by TMP.
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FIG. 1. Structural formulae of ()-epigallocatechin gallate, TMP, and MTX.
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EGCG and antibiotics. EGCG was obtained from Sigma Chemical Co. (Madrid, Spain). Stock dilutions were prepared in 0.15 mM H3PO4 to avoid oxidation of the drug. The other antibiotics (TMP and SMZ) were also obtained from Sigma. Stock dilutions of SMZ and TMP were prepared by following the National Committee for Clinical Laboratory Standards (NCCLS) guidelines (27).
Purification of DHFR. For the DHFR extraction, isolates 1 and 5 were inoculated onto MacConkey agar (Oxoid Ltd., Basingstoke, England) 24 h before use. Then liquid medium, Brilliant Green Bile 2% broth (Oxoid), was inoculated with the isolates, and these broth cultures were incubated aerobically at 37°C and shaken at 100 cycles per min. Bacteria were grown to mid-log phase, harvested by centrifugation (1,600 rpm, 30 min), and washed twice in 50 mM phosphate buffer (pH 7.0), followed each time by a new centrifugation (1,600 rpm, 5 min). The cell lysis, centrifugation, and dialysis steps were carried out between 4 and 8°C. Fast protein liquid chromatography purification steps were performed at room temperature. Cell paste from 2 liters of culture (approximately 10 g of bacteria) was suspended in 30 ml of buffer A (5 mM Tris-HCl, pH 7.4, 1 mM EDTA) containing 0.1 mM phenylmethylsulfonyl fluoride as a protease inhibitor, and the cell suspension was homogenized in a Potter homogenizer, followed by ultrasonication. After centrifugation at 36,000 rpm for 30 min to remove cell debris, the supernatant was filtered. This supernatant was brought to 40% saturation with solid ammonium sulfate under continuous stirring. After 1 h the solution was centrifuged at 35,000 rpm for 30 min, and the pellet was discarded. Additional ammonium sulfate was added to the clear supernatant to give 90% saturation, and the mixture was stirred for 1 h. After centrifugation, the precipitates were suspended in 2 ml of buffer B (10 mM potassium phosphate buffer, pH 7.4, 2 mM ß-mercaptoethanol). Concentrated enzyme (2-ml samples) was loaded onto a gel filtration column (Sephacryl S-75 26/60 Hi-Prep; Amersham Pharmacia Biotech Europe GmbH, Barcelona, Spain) equilibrated with buffer B and eluted at 0.5 ml/min. The active fractions were applied to an MTX-agarose (Sigma) column equilibrated with 50 mM potassium phosphate buffer, pH 6.5, containing 100 mM KCl. The column was then washed with 200 ml 50 mM potassium phosphate buffer, pH 6.5, containing 2 M KCl. The enzyme was eluted using 10 ml of 50 mM Tris-HCl, pH 8.6, containing 1 M KCl and 2 mM folic acid. Fractions containing DHFR activity were combined, dialyzed overnight against 2 liters buffer B (three times), concentrated in an Amicon concentrator (YM-10 membrane), and stored at 80°C. The DHFR concentration was determined by MTX titration of enzyme activity (35), while the total protein concentration was determined using the Bio-Rad protein assay procedure with bovine serum albumin as the standard.
DHFR assays and kinetics data analysis.
DHF was obtained from Aldrich Chemie GmbH (Madrid, Spain) and NADPH from Sigma. DHFR activity was determined at 25°C by monitoring the decrease in absorbance of NADPH and DHF at 340 nm (
= 11,800 M1 cm1 [38]) using a Perkin-Elmer Lambda-2 spectrophotometer with 1.0-cm-light-path cuvettes. Temperature was controlled at 25°C using a Haake D1G circulating bath with a heater/cooler and was checked using a Cole-Parmer digital thermometer with a precision of ±0.1°C. Experiments were performed in a buffer containing 2-(N-morpholino)ethanesulfonic acid (MES; 25 mM), sodium acetate (25 mM), Tris (50 mM), and NaCl (100 mM). The pH of the reaction was measured before and after the experiment. The assays were started by adding the enzyme. In the absence of the enzyme, the rate of absorbance change was negligible. The concentrations of DHFR, NADPH, and DHF are given in the text or in the legends to the figures. One unit is defined as the amount of enzyme required to convert 1 µmol of DHF to THF in 1 min at 25°C. The maximum steady-state rate (Vmax) and the Michaelis constants of DHFR for DHF (KmDHF) and NADPH (KmNADPH) were determined from the curvature evident in plots of disappearance of NADPH and DHF versus time (10 determinations). For KmDHF or KmNADPH determinations, the initial concentration of saturating NADPH (100 µM) or DHF (200 µM) was considered constant during the overall consumption of 10 µM DHF or 20 µM NADPH by the enzyme (3 nM), respectively. Data were fitted by nonlinear regression to the integrated form of the Michaelis equation (6), using Marquardt's algorithm (24) implemented in Sigma Plot 8.02 for Windows (36).
DHFR inhibition experiments and kinetics data analysis. Initial velocity inhibition experiments were carried out on S. maltophilia DHFR with TMP and EGCG. For this purpose, one substrate (NADPH) was held constant at the saturating concentration while the other substrate (DHF) and the inhibitor (TMP or EGCG) were varied. To prevent the oxidation of EGCG, the reaction mixture contained 1 mM N-acetylcysteine (Sigma). The extent of recovery of enzymatic activity following inhibition induced by preincubation with DHFR inhibitors was determined as follows. DHFR (0.15 µM) was preincubated for 30 min at 25°C in a buffer containing TMP or EGCG. An aliquot of the incubation mixture was then diluted 50-fold into a reaction mixture containing the buffer, NADPH (100 µM), and DHF (20 µM). The recovery of enzyme activity was determined by continuous monitoring at 340 nm.
Broth dilution MIC determination. MICs for the 18 isolates were determined by the broth dilution method at a final inoculum of 5 x 105 CFU/ml using cation-adjusted Mueller-Hinton broth (Fluka). The final inoculum was verified by plating in duplicate 100 µl of a 100-fold saline dilution onto MacConkey agar according to the NCCLS guidelines (27). After aerobic incubation at 35°C for 24 h, the lowest concentration of the twofold serially diluted antibiotic at which no visible growth occurred was defined as its MIC.
Time-kill assays for detection of EGCG bactericidal and bacteriostatic effects.
A time-kill assay was performed for isolate 1. Glass tubes containing cation-adjusted Mueller-Hinton broth, with doubling antibiotic concentrations, were inoculated with 5 x 105 CFU/ml and were incubated aerobically at 35°C for 24 h. Antibiotic concentrations were chosen to comprise three twofold concentrations above and two twofold dilutions below the broth dilution MIC. Inoculation of each serially diluted antibiotic tube was performed by following NCCLS guidelines for the broth dilution method (27). Viability counts of antibiotic-containing suspensions were carried out at 0, 3, 6, 12, and 24 h by plating 10-µl aliquots of 10-fold dilutions from each tube in sterile saline onto Columbia agar supplemented with 5% defibrinated sheep blood. The plates used to recover organisms were incubated at 37°C for 24 h. The lower limit of sensitivity of colony counts was 100 CFU/ml. Time-kill assay results were analyzed by determining changes in the log10 CFU/ml compared to the counts at time zero for the six different concentrations of EGCG. Bactericidal activity was defined as a reduction from the count in the initial suspension of
3 log10 CFU/ml after incubation at 37°C for 24 h, while the effect was considered bacteriostatic if the inoculum was reduced by 0 to 3 log10 CFU/ml.
Checkerboard synergy testing.
Checkerboard tests were performed for all isolates by broth dilution in cation-adjusted Mueller-Hinton broth combining eight doubling concentrations of EGCG with another eight dilutions of SMZ and TMP, respectively. The inoculum was prepared by suspending bacterial growth from blood agar plates in sterile saline to a final density of 0.5 McFarland and diluting in Mueller-Hinton broth to a final inoculum of 5 x 105 CFU/ml. Tubes were incubated aerobically overnight at 35°C. Fractional inhibitory combinations (FICs) were calculated as the MIC of the antibiotic and EGCG in combination divided by the MIC of the antibiotic or EGCG alone, and the FIC index was obtained by adding the FICs. FIC indices were defined as synergistic when values were
0.5 and antagonistic when values were >4. Results that fell between synergy and antagonism were defined as additive or indifferent.
Time-kill synergy determinations.
Time-kill tests were performed in glass tubes with 1 ml of cation-adjusted Mueller-Hinton broth. Each isolate was tested against TMP, SMZ, and EGCG alone at a concentration equivalent to 0.25 times the MIC (0.25xMIC) and in combinations at this concentration. Antimicrobial solutions were transferred to the tubes and inoculated with each isolate. The final inoculum was approximately 5 x 105 CFU/ml. Tubes were incubated aerobically at 35°C for 16 h. Colony counts were performed at 0 and 16 h. Samples (100 µl) from these tubes were removed and inoculated into serial 10-fold dilutions in 0.9% saline. Aliquots (50 µl) were then placed on MacConkey agar plates for counting of surviving colonies. The limit of quantification was of 5 x 102 CFU/ml. Synergy was assumed when a
2 log10 decrease in the viable colony count was obtained with the combination at 24 h, compared with the viable count obtained with the more active of the two compounds alone, and when a
2 log10 decrease in the colony count was obtained with the combination at 24 h, compared with the starting inoculum.
Experiments with leucovorin. The 18 isolates (final inoculum, 5 x 105 CFU/ml) were grown on 96-well microplates containing TMP, SMZ, and EGCG (at 0.5xMIC for each isolate) in cation-adjusted Mueller-Hinton broth with and without 0.4 mM leucovorin (Sigma). Control plates contained no antibiotic. The plates were sealed and incubated aerobically at 35°C for 24 h. After that time, absorbance at 405 nm was read in a microplate spectrophotometer (SPECTRAmax, 340PC384; Molecular Devices Corporation, CA).
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TABLE 1. Susceptibilities of S. maltophilia to tested antibiotics
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FIG. 2. Effect of EGCG on the viability of S. maltophilia isolate 1 in liquid medium (time-kill curve). S. maltophilia isolate 1 was cultured aerobically in cation-adjusted Mueller-Hinton broth at 35°C with reciprocation in the presence of EGCG at concentrations of 512 (+), 256 (), 128 ( , 64 (x), 32 ( ), 16 ( ), and 0 ( ) µg/ml. Culture samples (100 µl) were taken at the times indicated, and viability was measured by the plate colony count technique.
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TABLE 2. Kinetics and inhibition characteristics of S. maltophilia DHFRs purified from isolates 1 and 5
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FIG. 3. (A) Double-reciprocal plots of the reaction of DHFR from S. maltophilia isolate 1 (3 nM) with NADPH (100 µM) and DHF (variable substrate) in the presence of TMP at pH 7.4. TMP concentrations were 10 (), 20 ( ), 40 ( ), and 60 ( ) µM. Each point represents the mean ± standard deviation for five separate experiments. (B) Secondary plot for the apparent KmDHF, obtained from panel A, versus the concentration of TMP.
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FIG. 4. (A) Double-reciprocal plots of the reaction of DHFR from S. maltophilia isolate 1 (3 nM) with NADPH (100 µM) and DHF (variable substrate) in the presence of EGCG at pH 7.4. EGCG concentrations were 0 (), 10 ( ), 20 ( ), and 40 ( ) µM. Each point represents the mean ± standard deviation for five separate experiments. (B) Secondary plots for the apparent KmDHF, obtained from panel A, versus the concentration of EGCG.
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TABLE 3. Synergy method results
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FIG. 5. Effects of TMP (black bar), SMZ (white bar), and EGCG (grey bar) on S. maltophilia growth after a 24-h incubation in the presence and absence of 0.4 mM leucovorin. The data are expressed assuming 100% growth for the untreated control. Bars represent the average growth for the 18 isolates, and the error bars represent the standard deviations of the data.
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The findings of this study could be of interest because S. maltophilia is commonly resistant to many currently available broad-spectrum antimicrobial agents, including ß-lactams, aminoglycosides, and quinolones (10). TMP alone or in combination with SMZ is an effective and inexpensive antibacterial remedy. Lately, however, a dramatic increase in TMP and SMZ resistance has been seen. Bacterial resistance to TMP and SMZ is mediated mainly by the following five mechanisms: (i) the permeability barrier and/or efflux pumps, (ii) naturally insensitive target enzymes, (iii) regulational changes in the target enzymes, (iv) mutational or recombinational changes in the target enzymes, and (v) acquired resistance by drug-resistant target enzymes. Naturally insensitive DHFR enzymes are found among, for instance, Bacteroides species, Clostridium species, Neisseria species, and Moraxella catarrhalis (17, 18). Overproduction of chromosomal DHFR caused by promoter mutations has reportedly occurred in E. coli (17). A single amino acid substitution in the DHFR gene and altered chromosomally encoded DHFR have been considered responsible for resistance to TMP in S. aureus (8) and Streptococcus pneumoniae (31). In strains of TMP-resistant Haemophilus influenzae, changes in both the promoter and coding regions of the DHFR genes have been found (9). From the beginning of the use of cotrimoxazole, approximately 20 different TMP-resistant transferable DHFR genes have been characterized (17). The most prevalent of these genes, the DHFRI gene and variants of the DHFRII gene, mediate high-level resistance to TMP, with MIC increases of more than 1,000-fold, and are more frequently found in gram-negative enteric bacteria. The resistance of S. maltophilia to TMP has not been well characterized, probably due to the lack of availability of its DHFR. Comparative studies of a highly TMP resistant S. maltophilia isolate (isolate 1) and a TMP-susceptible isolate (isolate 5) have allowed us to analyze the possible mechanisms of S. maltophilia TMP resistance. Although changes in the permeability barrier and/or efflux pumps of the bacteria for TMP could not be disregarded, the fact that DHFRs from isolates 1 and 5 showed a 67-fold difference in Ki (Table 2) indicates that the main mechanism of resistance for isolate 1 could well be related to changes in the target enzyme. The two isolates showed similar levels of DHFR expression; thus, mechanisms of resistance resulting from DHFR overexpression or changes in promoter and/or coding regions of the DHFR genes do not seem to be of importance. Therefore, resistance could be due to mutational changes in the gene for DHFR increasing the Ki for the drug or to the acquisition of drug-resistant target enzymes. However, the latter hypothesis is less probable, because an intensive study of S. maltophilia resistance to cotrimoxazole showed that it cannot be explained by the presence of plasmid-specified TMP resistance determinants and that the increase probably relies on a chromosomal mechanism (2).
The antifolate character of EGCG is evident from its similarity to the action mechanism of the nonclassical antifolate TMP. Both inhibit S. maltophilia DHFR in a reversible, competitive, fast process and are synergistic with respect to SMZ, and bacterial growth inhibition in the presence of these drugs is reversed by growing S. maltophilia in a medium enriched with leucovorin. Although the MICs of TMP and EGCG are comparable, there is not an exact correlation between them for the different isolates studied, possibly indicating that different resistance mechanisms, not affecting DHFR, could also be involved. For example, factors related to permeability barriers and efflux pumps could differ for the drugs. The clinical relevance of these in vitro results will need to be confirmed by investigations of their therapeutic efficacy. Further studies with a higher number of TMP-resistant strains should be of interest to elucidate if EGCG maintains a good level of activity in all cases. If this proves to be the case, this drug could represent an alternative to TMP and could be used in combination with SMZ for the treatment of S. maltophilia infections.
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