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Antimicrobial Agents and Chemotherapy, July 2006, p. 2361-2367, Vol. 50, No. 7
0066-4804/06/$08.00+0 doi:10.1128/AAC.01437-05
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Unidad de Investigación, Hospital Universitario Son Dureta, and Institut Universitari d'Investigacions en Ciències de la Salut (IUNICS), Palma de Mallorca,1 Program Infection and Immunity, Fundació Caubet-CIMERA Illes Balears, Bunyola, Spain2
Received 8 November 2005/ Returned for modification 5 March 2006/ Accepted 16 April 2006
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Antimicrobial peptides (APs) are ubiquitous in nature, and in vertebrates they are the front line of defense against infections in those areas exposed to pathogens. There are four structural classes of APs: the disulfide-bonded ß-sheet peptides, the amphipathic
-helical peptides, the extended peptides, and the loop-structured peptides (22, 36). Despite their diverse sizes and structures, nearly all antimicrobial peptides have a strong net cationic (positive) charge, and the three-dimensional folding results in an amphipathic structure. These features are critical for bacterial killing (5, 22, 36). The microbicidal action of APs is initiated through electrostatic interaction with the anionic bacterial surface. In the case of gram-negative bacteria, APs interact with the acidic lipid A moiety of the lipopolysaccharide (LPS). This leads to a disorganization of the outer membrane (OM) and the access of APs to the periplasm, from which they reach the inner membrane (5, 22, 36, 41). The loss of inner membrane integrity eventually leads to bacterial death, although there is an increasing body of evidence to indicate that APs may have intracellular targets (5, 22, 36).
APs have some features that make them good candidates as antimicrobial agents. They have broad spectra of activity, they kill bacteria rapidly, and when they are used at concentrations close to the MIC, bacteria do not easily develop resistance. In addition, APs can act in synergy with classical antibiotics; APs decrease the MIC of a given antibiotic. Polymyxins B and E (colistin) are two APs originally synthesized from Bacillus polymyxa and made available for clinical use in the late 1950s and early 1960s. Soon after their introduction, their clinical use was limited due to perceived toxic side effects and to the emergence of new antimicrobials (10, 23). However, the occurrence of multidrug-resistant bacteria has prompted a reconsideration of polymyxin therapies. In addition, intensive research is under way to design new APs based on natural APs without the adverse effects of polymyxins.
A promising therapeutic approach would be to exogenously apply APs alone or in combination with conventional antibiotics. This is hampered by the important lack of in vivo studies of the actions of APs. An alternative approach would be to use compounds which render bacteria susceptible to those APs naturally present at the sites of infection. This is based on the idea that compounds which destabilize the bacterial surface sensitize bacteria to agents normally excluded (41). Chelators such as EDTA or sodium hexametaphosphate are well-studied examples of such compounds (41). However, the indiscriminating chelating activity reduces the value of chelators in clinical settings.
An increasing body of evidence shows that subinhibitory concentrations of many antibiotics modulate numerous bacterial traits, e.g., the morphology of cells, the expression of OM proteins, and the production of virulence factors (4, 9, 27, 28, 40, 42). This antibiotic effect may increase the sensitivities of the microorganisms to host defense systems, thus contributing to the eradication of the infecting bacteria. All of this has been particularly studied in the case of the quinolones.
This study provides evidence that subinhibitory concentrations of quinolones increase the sensitivities of three gram-negative pathogens (Klebsiella pneumoniae, Pseudomonas aeruginosa, and Haemophilus influenzae) to APs. Our results also show that quinolones have a direct effect on the OM, which might explain the increased sensitivity to APs after treatment with quinolones.
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Antibiotics and antimicrobial peptides. Ciprofloxacin and levofloxacin were provided by Aventis. Gentamicin, ceftazidime, polymyxins B and E, and human neutrophil defensin 1 (HNP-1) were purchased from Sigma. ß-Defensin 1 (HBD1) was purchased from Peprotech.
Antimicrobial peptide sensitivity assay. The bacterial strains were grown at 37°C in 5 ml of LB or sTSB, harvested (by centrifugation at 5,000 x g for 15 min at 5°C) in the exponential phase of growth, and washed three times with phosphate-buffered saline (PBS). To test the effect of 0.25x the MICs of the antibiotics, they were added when the culture reached the exponential phase, and after 1 h of incubation, the cultures were treated exactly as described before.
A suspension containing approximately 1 x 105 CFU/ml was prepared in 10 mM PBS (pH 6.5), 1% TSB, and 100 mM NaCl. Five microliters of this suspension was mixed in Eppendorf tubes with various concentrations of antimicrobial peptides to get a final volume of 30 µl. After 1 h of incubation, the contents of the Eppendorf tubes were plated on LB agar plates in the case of the Klebsiella and Pseudomonas strains or on chocolate agar plates in the case of Haemophilus.
Colony counts were determined, and the results were expressed as the percentages of the colony counts of bacteria not exposed to antibacterial agents. The 50% inhibitory concentrations (IC50s) of the antimicrobial peptides were defined as the concentrations that produced a 50% reduction in the colony counts compared with those of the bacteria not exposed to the antibacterial agents. All experiments were done with duplicate samples on three independent occasions.
Construction of luciferase reporter strains. The firefly luciferase reporter and Pir-dependent suicide vectors were constructed as follows.
(i) cps reporter suicide vector.
The vector pEPPcpsluc has been constructed previously (6). In this plasmid the luciferase gene is under the control of the cps promoter region. This plasmid was transformed into Escherichia coli S17-1
pir, which mobilized it into K. pneumoniae 52145. A Clm-resistant transconjugant was selected. The suicide vector was integrated into the transconjugant by homologous recombination, and this was confirmed by Southern blotting (data not shown).
(ii) pagP reporter suicide vector. A DNA fragment containing the promoter region of the pagP gene was amplified by PCR with the chromosomal DNA from strain 52145 as the template and Vent polymerase (New England Biolabs) and with primers PKpnPAgpF (5'-AGATAATGGCCGCGATGGAG-3') and KpnPagPinvR (5'-CATTCCAGGTCTGCGCTACG-3'). The primers were designed by using the sequence from the K. pneumoniae MGH78578 unfinished genomic sequence project (htpp://pedant.gsf.de/cgi-bin/wwwfly.pl). The PCR fragment was cloned into pCR-Blunt II-TOPO (Invitrogen) to obtain pBLUNTPKpnPagP. The cloned fragment was sequenced to ensure that no mistakes were introduced during amplification. This plasmid was digested with EcoRI, and a 1-kb fragment containing the pagP promoter region was gel purified and cloned into the EcoRI site of the vector pGPL01 (16). This vector contains a promoterless firefly luciferase gene and an R6K origin of replication. A plasmid in which the luciferase gene was under the control of the pagP promoter was identified by restriction digestion analysis and was named pGPLPknpPagP. This plasmid was electroporated into K. pneumoniae, and an Amp-resistant strain was selected in which the suicide vector was integrated into the genome by homologous recombination. This was confirmed by Southern blotting (data not shown).
(iii) pmrHFIJKLM reporter suicide vector. A 700-bp DNA fragment containing the promoter region of the operon was amplified by PCR with chromosomal DNA from strain 52145 as the template and Vent polymerase (New England Biolabs) and with primers PknppmrHF (5'-GGAATTCCGCGATGCCGGCCCGGCCTAC-3'; the EcoRI site is underlined) and PkpnpmrHR (5'-GGGTACCGTCGCATGACGGTTGCCGGTC-3', the KpnI site is underlined). The primers were designed by using the sequence from the K. pneumoniae MGH78578 unfinished genomic sequence project (htpp://pedant.gsf.de/cgi-bin/wwwfly.pl). The PCR fragment was digested with EcoRI and KpnI and cloned into the EcoRI-KpnI sites of pGPL01 to obtain pGPLPKpnpmrH. The cloned fragment was sequenced to ensure that no mistakes were introduced during amplification. This plasmid was electroporated into K. pneumoniae, and an Amp-resistant strain was selected in which the suicide vector was integrated into the genome by homologous recombination. This was confirmed by Southern blotting (data not shown).
Luciferase activity. The reporter strains were grown on an orbital incubator shaker (180 rpm) until late log phase, and the optical density at 540 nm (OD540) was recorded. A 100-µl aliquot of the bacterial suspension was transferred to an Eppendorf tube and mixed with 100 µl of luciferase assay reagent (1 mM D-luciferin [Synchem] in 100 nM citrate buffer [pH 5]). The luminescence was immediately measured with a luminometer (Hidex). The results are expressed as relative light units (RLU) per OD540. All measurements were done in triplicate on at least three separate occasions.
Outer membrane permeability to NPN. 1-N-Phenyl-naphthylamine (NPN) is an uncharged hydrophobic fluorescent probe whose quantum yield suddenly increases when it is transferred from a hydrophilic to a hydrophobic environment. When NPN is added to cells it fluoresces weakly since it is unable to breach the OM barrier, and it is also a substrate for efflux pumps. However, upon OM destabilization and in the presence of an energy inhibitor, NPN partitions into the membrane, emitting a bright fluorescence (1, 26, 41).
A suspension of exponentially growing cells (OD600, 0.5) was prepared in 2 mM HEPES (pH 7.5) and 5 µM carbonyl cyanide m-chlorophenylhydrazone. One milliliter of this suspension was transferred to 1-cm fluorimetric cuvettes, and NPN was added (final concentration, 10 µM). After NPN addition, the following antibiotics or CaCl2 was added at the indicated concentrations: ciprofloxacin, 0.6 µg/ml; levofloxacin, 0.6 µg/ml; and CaCl2, 10 mM. In preliminary experiments these were the minimal concentrations causing the characteristic effects in this assay (see Results). Quenching was not observed under these conditions. The fluorescence was monitored with a spectrofluorophotometer (RF-5301PC; Shimadzu), set as follows: excitation, 350 nm; emission, 420 nm; and slit width, 3 nm. The results are expressed as relative fluorescence units (RFU). Measurements were recorded as ASCII files and were exported to a personal computer for plotting. All measurements were done in duplicate on three separate occasions.
Dansyl polymyxin B binding studies. K. pneumoniae 52145 was grown at 37°C in 5 ml of LB medium, harvested (by centrifugation at 5,000 x g for 15 min at 5°C) in the exponential phase of growth, and washed three times with PBS. To test the effects of 0.25x the MICs of ciprofloxacin and levofloxacin, the antibiotics were added when the culture reached the exponential phase, and after 1 h of incubation, the culture was washed three times with PBS.
For the binding experiments, a suspension (OD600, 0.5) was prepared in 2 mM HEPES (pH 7.5), and 1 ml of this suspension was transferred to 1-cm fluorimetric cuvettes. The fluorescence spectra of dansyl polymyxin B (Molecular Probes) were recorded at room temperature from 400 to 600 nm at an excitation wavelength of 320 nm with a spectrofluorophotometer (RF-5301PC; Shimadzu). The slit width was 3 nm. The results are expressed as RFU. The measurements were recorded as ASCII files and were exported to a personal computer for plotting. All measurements were done in duplicate on four separate occasions.
Statistical methods. Comparisons among groups were made by the two-sample t test or, when the requirements were not met, by the Mann-Whitney U test. A P value of <0.05 was considered statistically significant.
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The results shown in Fig. 1 demonstrate that K. pneumoniae 52145 treated with 0.25x the MIC of ciprofloxacin was more sensitive to polymyxin B (Fig. 1A), polymyxin E (Fig. 1B), HNP-1 (Fig. 1C), and HBD1 (Fig. 1D) than the nontreated bacteria. The fact that the APs tested are not structurally related indicates that the sensitivity of ciprofloxacin-treated bacteria was not specific for the AP used.
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FIG. 1. A 1-h treatment with ciprofloxacin increases the sensitivity of K. pneumoniae 52145 to APs. Bacteria were exposed to different amounts of (A) polymyxin B, (B) polymyxin E, (C) HNP-1, and (D) HBD1. Each point in panels A, B, and D represents the mean and standard deviation for six samples from three independently grown batches of bacteria; and significant survival differences (P < 0.05) between bacteria treated with 0.25x the MIC ciprofloxacin ( ) and nontreated bacteria () are indicated by asterisks. The error bars in panel C display the standard deviation from the mean of three experiments, each one run in duplicate, and an asterisk indicates a significant difference between bacteria treated with ciprofloxacin (white bar) and nontreated ones (black bar).
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FIG. 2. Levofloxacin and nalidixic acid but not gentamicin or ceftazidime increase the sensitivity of K. pneumoniae 52145 to polymyxin B. The effects of a 1-h treatment with (A) levofloxacin, (B) nalidixic acid, (C) gentamicin, and (D) ceftazidime on the survival of bacteria in the presence of polymyxin B are shown. Each point represents the mean and standard deviation of six samples from three independently grown batches of bacteria, and significant survival differences (P < 0.05) between bacteria treated with 0.25x the MIC of antibiotics ( ) and nontreated bacteria () are indicated by asterisks.
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FIG. 3. A 1-h treatment with ciprofloxacin increases the sensitivity of K. pneumoniae ciprofloxacin-resistant strains to polymyxin B. Each point represents the mean and standard deviation of six samples from three independently grown batches of bacteria, and significant survival differences (P < 0.05) between bacteria treated with ciprofloxacin (white symbols) and nontreated bacteria (black symbols) are indicated by asterisks. The MICs of the strains to ciprofloxacin, whether the strains express porins OmpK35 and OmpK36, whether the strains actively efflux quinolones, and the presence or absence of modifications in gyrA and parC, are also shown.
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FIG. 4. A 1-h treatment with 0.25x the MIC of ciprofloxacin increases the sensitivities of gram-negative bacteria to APs. P. aeruginosa PAO1 (squares) was exposed to different amounts of (A) polymyxin B and (B) polymyxin E. Symbols: , P. aeruginosa PAO1 not treated with ciprofloxacin; , P. aeruginosa PAO1 treated with ciprofloxacin. H. influenzae 05-118741 (triangles) was exposed to different amounts of (C) polymyxin B and (D) polymyxin E. Symbols: , H. influenzae not treated with ciprofloxacin; , H. influenzae treated with ciprofloxacin. Each point represents the mean and standard deviation for six samples from three independently grown batches of bacteria, and significant survival differences (P < 0.05) between bacteria treated with 0.25x the MIC of antibiotics (white symbols) and nontreated bacteria (black symbols) are indicated by asterisks.
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Ciprofloxacin and levofloxacin permeabilize the outer membrane. A remaining question is to explain how quinolone treatment renders gram-negative bacteria more sensitive to APs. It has been shown that quinolones chelate divalent cations (24, 29). Since the molecular basis of the integrity of the OM lies in the cation binding sites of LPS, it is tempting to speculate that quinolones may disturb the stability of the OM, thereby facilitating the actions of APs (37, 41). This proposed mechanism is similar to that of EDTA (37, 41). However, this hypothesis has been disputed, and recently, Lindner and colleagues have shown that quinolones do not chelate cations from their LPS-binding sites (25). It must be noted that purified LPS does not necessarily mimic the complex environment of the OM, and therefore, care should be taken to directly extrapolate the findings obtained with purified LPS to whole bacteria (33).
To determine whether the quinolones ciprofloxacin and levofloxacin affect the OM, we performed the NPN assay, which is commonly used to evaluate the interaction of compounds with the OM. No fluorescence accumulation was evident when ciprofloxacin or levofloxacin was added to the buffer containing NPN without cells (data not shown). The addition of ciprofloxacin or levofloxacin to K. pneumoniae cells in the presence of NPN caused an increase in fluorescence (Fig. 5A and B, respectively, straight lines). To confirm the disrupted action on the OM via the chelation of divalent cations with quinolones, we asked whether divalent cations could inhibit the increase in NPN fluorescence. We found that addition of Ca2+ inhibited the increase in NPN fluorescence induced by ciprofloxacin or levofloxacin in K. pneumoniae (Fig. 5A and B, respectively, dotted lines). Similar results were obtained when Mg2+ instead of Ca2+was added (data not shown). We sought to determine whether Ca2+ would then inhibit the increased sensitivity to polymyxin B after treatment of the bacteria with ciprofloxacin. The IC50 of polymyxin B for K. pneumoniae treated with 0.25x the MIC of ciprofloxacin was 0.8 ± 0.1 µg/ml, whereas the IC50 of polymyxin B for K. pneumoniae treated with 0.25x the MIC of ciprofloxacin and 10 mM Ca2+ was 2.3 ± 0.2 µg/ml, which was not significantly different (P > 0.05) from those for K. pneumoniae treated with 10 mM Ca2+ and nontreated bacteria (2.1 ± 0.1 µg/ml and 2.2 ± 0.4 µg/ml, respectively).
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FIG. 5. Time course of increase in NPN fluorescence intensity in K. pneumoniae 52145 (A and B) and P. aeruginosa PAO1 (C and D) cells treated with quinolones. At 5 s NPN was added to intact cells (gray arrows), and at 20 s compounds were added (black arrows). (A) Ciprofloxacin (straight line) or ciprofloxacin and 10 mM Ca2+ (dotted line) were added to K. pneumoniae intact cells; (B) levofloxacin (straight line) or levofloxacin and 10 mM Ca2+ (dotted line) were added to K. pneumoniae intact cells; (C) ciprofloxacin (straight line) or ciprofloxacin and 10 mM Ca2+ (dotted line) were added to P. aeruginosa intact cells; (D) levofloxacin (straight line) or levofloxacin and 10 mM Ca2+ (dotted line) were added to P. aeruginosa intact cells. The data are representative of three separate independent experiments (coefficient of variation, less than 4%).
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Finally, we asked whether quinolones may affect the OMs of other gram-negative bacteria as well. Addition of ciprofloxacin or levofloxacin to P. aeruginosa cells also triggered an increase in fluorescence (Fig. 5C and D, straight lines). This effect was also inhibited by adding Ca2+ (Fig. 5C and D, dotted lines).
In summary, our findings support the idea that quinolones interact with the OM and increase its permeability, while divalent cations antagonize this action. Understanding of the discrepancy between our data and those of other investigators would probably require a strict comparison of the experimental conditions.
Ciprofloxacin and levofloxacin increase the binding of APs to the surface. We evaluated whether ciprofloxacin and levofloxacin indeed increase the binding of APs to the OM by using dansylated polymyxin B. The dansylated peptide exhibits a low fluorescent yield when it is diluted into aqueous buffer; however, the fluorescence yield increases, with the maximum fluorescence shifting to a lower wavelength in a hydrophobic environment, such as a bacterial membrane (32, 35). Therefore, there is a correlation between fluorescence and the amount of dansylated polymyxin B bound to the bacteria (2, 32).
Figure 6 shows that dansyl polymyxin B (0.5 µM) exhibited a low fluorescence yield when it was incubated in buffer only (
max, 490 nm) (Fig. 6A and B, gray lines). When it was incubated with nontreated K. pneumoniae (Fig. 6A and B, lines a), there was an increase in the fluorescence yield (
max, 475 nm) which was higher in the case of bacteria treated with 0.25x the MIC of ciprofloxacin (
max, 466 nm) (Fig. 6A, line b) or with 0.25x the MIC of levofloxacin (
max, 464 nm) (Fig. 6B, line b). These experiments were repeated with 1 µM dansyl polymyxin B. The fluorescence yield in buffer only was similar to that obtained with 0.5 µM dansyl polymyxin B (data not shown). As before, nontreated bacteria showed a lower fluorescence yield (Fig. 6A and B, lines c) than ciprofloxacin-treated bacteria (Fig. 6A, line d) and levofloxacin-treated bacteria (Fig. 6B, line d). Unlabeled polymyxin B outcompeted dansylated polymyxin B, showing that binding was specific and not due to nonspecific features of the dansyl group (data not shown).
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FIG. 6. Binding of dansyl polymyxin B to K. pneumoniae 52145 treated with ciprofloxacin (A) and levofloxacin (B). Lines: a, 0.5 µM dansyl polymyxin B was added to nontreated K. pneumoniae cells; b, 0.5 µM dansyl polymyxin B was added to bacteria treated with 0.25x the MIC of a quinolone; c, 1 µM dansyl polymyxin B was added to nontreated K. pneumoniae cells; d, 1 µM dansyl polymyxin B was added to quinolone-treated bacteria. Gray line, 0.5 µM dansyl polymyxin B was added to 5 mM HEPES (pH 7.5). The data are representative of four separate independent experiments (coefficient of variation, less than 5%).
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Potential therapeutic implications. We believe that our results may open new avenues of research for the design of new therapeutic alternatives to conventional antibacterial treatments. The use of compounds based on the structures of quinolones but modeled to increase their membrane action should be useful for rendering bacteria susceptible to APs naturally present at the sites of infection. We are aware that in healthy tissues the concentration of APs is relatively low, which may cast doubts on the feasibility of this approach. Nevertheless, ample evidence demonstrates that the amounts of APs increase rapidly in infected tissues and that several APs are present at the sites of infection, acting cooperatively to kill bacteria (11, 12, 20, 21, 39).
The fellowship support to M. A. Campos from Govern Illes Balears is gratefully acknowledged. J.A.B. is the recipient of a Contrato de Investigador from the Fondo de Investigación Sanitaria. This work has been funded by grants from Fondo de Investigación Sanitaria (PI01/3095 and PI04/1854 to J.A.B.), Red Respira (RTIC C03/11, Instituto de Salud Carlos III, Spain), and Red REIPI (RTC C03/14 Instituto de Salud Carlos III, Spain).
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