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Antimicrobial Agents and Chemotherapy, October 2007, p. 3642-3649, Vol. 51, No. 10
0066-4804/07/$08.00+0 doi:10.1128/AAC.00160-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Pharmaceutical Microbiology Unit, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn, Meckenheimer Allee 168, 53115 Bonn, Germany
Received 4 February 2007/ Returned for modification 5 April 2007/ Accepted 23 July 2007
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Resistance development in P. aeruginosa due to the selection of mutants during antimicrobial therapy is a frequent and serious problem. This is especially true for cystic fibrosis patients with chronic lung infections, in whom hypermutable P. aeruginosa strains are found at high frequencies (5, 23, 28). These strains show an increased spontaneous mutation rate due mostly to defects in the DNA methyl-directed mismatch repair system (23, 29). The hypermutation phenotype seems to be an advantage for adaptation to a heterogeneous and fluctuating environment like the lung of a chronically infected patient (28) and is the main cause of the development of multidrug resistance (23, 30).
Antibiotics with high levels of antibacterial activity and low potentials for stimulating resistance development are ideal agents for the treatment of P. aeruginosa infections. Both the ß-lactams meropenem and ceftazidime show a high degree of antipseudomonal activity. However, in contrast to ceftazidime, meropenem is said to have low potential for stimulating resistance development (7).
In connection with mutant enrichment, the mutant selection window is generally discussed (9). The mutant selection window is defined as the range of concentrations of an antimicrobial agent extending from the minimum concentration that blocks the growth of the majority of wild-type cells up to that required to block the growth of the least susceptible one-step mutant of the bacterial strain. The lower concentration is close to the MIC of the antimicrobial drug. The upper boundary of the mutant selection window is also called the mutant prevention concentration (MPC) (9). According to this paradigm, due to the lack of a selective advantage, enrichment with resistant mutants does not occur when the drug concentration is below the MIC for the parent strain during a dosing interval.
The most prevalent mutation-mediated mechanism of resistance to meropenem is the loss of the porin OprD (31). Reduced production of OprD in so-called nfxC-type mutants confers slightly reduced susceptibility to meropenem (27). Furthermore, meropenem is a substrate of the MexAB-OprM, MexCD-OprJ, and MexXY-OprM efflux pumps, and their upregulated production causes a decrease in meropenem susceptibility (25). Mutation-mediated resistance to ceftazidime is, in the majority of cases, due to the overproduction of the chromosomally encoded inducible AmpC ß-lactamase (18). The inactivation of the amidase AmpD leads to an increase of inducer molecules and was found to be the most prevalent mechanism of AmpC hyperproduction in clinical strains (14). Recently, a three-step escalating mechanism of ampC upregulation due to mutations in ampD and two additional ampD homologues, ampDh2 and ampDh3, was elucidated (15). Furthermore, the hyperproduction of the efflux pump MexAB-OprM leads to reduced ceftazidime susceptibility (25).
In the past, several in vitro studies were conducted to investigate and improve the efficacies of meropenem (3, 35) and ceftazidime (1, 26) treatments against P. aeruginosa infections. Enrichment with meropenem- and ceftazidime-resistant mutants of wild-type P. aeruginosa PAO1 and a hypermutable variant of P. aeruginosa PAO1 during exposure to constant antimicrobial concentrations has been studied previously (30). However, to our knowledge, no previous studies have investigated hypermutable P. aeruginosa strains under the influence of clinically achievable pharmacokinetic profiles of meropenem and ceftazidime. Moreover, no elaborated quantitative, phenotypical, and genotypical characterization of the mutants selected has been carried out, and the hypothesis of mutant selection windows has not been taken into consideration to investigate the emergence of resistance.
The aim of our study was to address these issues. Therefore, we used in vitro models simulating the present standard dosing regimens for meropenem and ceftazidime to examine the P. aeruginosa wild-type strain PAO1 and a clinical hypermutable P. aeruginosa strain.
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Susceptibility tests. Antimicrobial susceptibility testing was performed using the broth microdilution method recommended by the CLSI (6).
Mutation frequency determination. For P. aeruginosa strain 12-09-15, the mutation frequency on selective rifampin (300 mg/liter) agar was determined in triplicate as described elsewhere (29).
In vitro model experiments. Ceftazidime (GlaxoSmithKline) and meropenem (AstraZeneca) were kindly provided by the manufacturers. We simulated concentration-time profiles of meropenem and ceftazidime during a dosing regimen of three-times-daily (dosing interval, 8 h) short-time infusions of 1 and 2 g, respectively, by using pharmacokinetic data published by Krueger et al. and Luethy et al. (17, 20). The pharmacokinetic parameters were as follows. For meropenem, the maximum concentration of the drug (Cmax) was 56.1 mg/liter and the half-life was 0.45 h, and for ceftazidime, the Cmax was 173.8 mg/liter and the half-life was 1.96 h. For the simulation of concentration-time curves, the in vitro model of Grasso et al. (12) with slight variations was used. The central compartment (150 ml) of the model was inoculated with an overnight culture of the respective bacterial test strain. After 1 h of incubation at 37°C, an exponential-phase culture was obtained and treatment was started with an initial inoculum of approximately 2.1 x 107 ± 0.686 x 107 CFU/ml. Counts of bacterial colonies were determined and corrected for the loss of CFU due to dilution according to the method of Keil and Wiedemann (16). Mutants were detected on selective media (ceftazidime at 8 mg/liter for P. aeruginosa PAO1 and meropenem at 2 and 8 mg/liter for P. aeruginosa PAO1 and P. aeruginosa 12-09-15, respectively). The detection limit for wild-type and mutant colonies was 1 CFU/ml.
Determination of antibiotic concentration. Samples taken during the in vitro model experiments were additionally investigated for antibiotic concentrations by a microbiological assay according to a previously described protocol (16) using Klebsiella pneumoniae IV-02-03 and Klebsiella oxytoca IV-03-61 as test organisms for meropenem and ceftazidime, respectively.
Antibacterial effect and pharacokinetic-pharmacodynamic analysis. The difference between the lowest log10 number of CFU per millimeter observed in a killing curve and the log10 number of CFU per milliliter of the initial inoculum indicated the maximal bactericidal effect (Rmax). Determining the areas above the killing curves (AACs) facilitated the comparison of killing curves. AACs for all killing curves from 0 to 24 h were calculated by the trapezoidal method as previously described (32). By using the pharmacokinetic data for meropenem and ceftazidime published by Krueger et al. and Luethy et al. (17, 20), the cumulative percentage of the dosing interval during which the drug concentration exceeded the MIC, T>MIC, as well as the Cmax/MIC ratio, was determined for each simulation.
Efflux pump inhibition test. Efflux pump overexpression was detected using an efflux pump inhibitor test (19). Levofloxacin MICs were tested either with or without a 20-µg/ml concentration of the efflux pump inhibitor Phe-Arg-ß-naphthylamide (Sigma-Aldrich, Taufkirchen, Germany). A reduction of the levofloxacin MIC by at least 32-fold in the presence of Phe-Arg-ß-naphthylamide demonstrated the overproduction of efflux pumps.
Cephalosporinase inhibition test. The overproduction of the chromosomally encoded cephalosporinase AmpC was evaluated by a disk diffusion test with 30-µg ceftazidime disks (Oxoid Limited, Basingstoke, United Kingdom) on Mueller-Hinton agar with or without cloxacillin (Sigma-Aldrich, Taufkirchen, Germany) at 500 mg/liter as described elsewhere (8). The test was considered positive when the diameter of the inhibition zone around the ceftazidime disk increased by at least 10 mm in the presence of cloxacillin.
Competitive growth assays with mutant and parent strains. The fitness of the mutants selected during the in vitro simulations in comparison to that of the parent strains was investigated. Selected mutants (retrieved from the last sample from the respective in vitro model) and the corresponding parent strain, each inoculated at 102 CFU/ml, were incubated at 37°C for 8 h in a batch culture in the absence of the antimicrobial agent. The P. aeruginosa mutants selected during the in vitro model experiments with PAO1 and meropenem, PAO1 and ceftazidime, and 12-09-15 and meropenem were designated PAO1/MEM, PAO1/CAZ, and 12-09-15/MEM, respectively.
PCR and sequencing experiments. For P. aeruginosa 12-09-15, the mismatch repair system genes mutS, mutL, and uvrD were amplified and sequenced. Therefore, the following primers were used: mutS-f (5'-CTTCCGAAGGCCCGTATGA-3'), mutS-r (5'-TTGTGCGGTAGTCCGTCAGA-3'), mutS-s1 (5'-ATGGGACTTCGATCGCGA-3'), mutS-s2 (5'-ATCGGCACCTATCCCGAA-3'), mutS-s3 (5'-ACGACCTGGCGCTGGATGC-3'), mutL-f (5'-ATGAGTGAAGCACCGCGTAT-3'), mutL-r (5'-CGCAGGAAGAGCTTGTCCA-3'), mutL-s1 (5'-TGCACGAGGCGCGAGACGAGC-3'), mutlL-s2 (5'-TATACCCGGCCGGAGGCG-3'), uvrD-f (5'-ATGAACGACGACCTCTCCCTC-3'), uvrD-r (5'-CTACAGGGCTTCCAGCTTG-3'), uvrD-s1 (5'-ACCATCCCGGCGTGCTCGAGC-3'), and uvrD-s2 (5'-AACGACGCGGCGCTGGAACG-3'). Primers D1 (5'-CCTCAACAAGAGTGACCAAC-3') and D2 (5'-TTACAGGATCGACAGCGGA-3') were used to amplify and sequence the oprD genes from the parent strains P. aeruginosa PAO1 and P. aeruginosa 12-09-15 and the mutants P. aeruginosa PAO1/MEM and P. aeruginosa 12-09-15/MEM selected in the in vitro model experiments. For the amplification and sequencing of ampD from P. aeruginosa PAO1 and P. aeruginosa PAO1/CAZ, the previously described primers DE1 and DE2 were used (2). Sequencing was performed by SEQLAB Sequence Laboratories Göttingen GmbH, Göttingen, Germany.
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TABLE 1. Pharmacodynamic parameters and pharmacokinetic/pharmacodynamic indicesa
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FIG. 1. (A and B) CFU counts indicating the total populations of PAO1 cells and the populations of mutant cells during treatment with meropenem (three 1-g doses) (A) and during treatment with ceftazidime (three 2-g doses) (B). (C) CFU counts indicating the total population of 12-09-15 cells and the population of mutant cells during treatment with meropenem (three 1-g doses). Arrows indicate dosing times.
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log10 CFU/ml, and the Rmax for P. aeruginosa 12-09-15, reached at 3 h, was –1.23
log10 CFU/ml. The drug concentration fell below the MICs for P. aeruginosa PAO1 and P. aeruginosa 12-09-15 after 5.33 and 2.33 h, respectively. For both strains, bacterial regrowth occurred shortly afterwards, and both strains reached a cell count above the inoculum after 8 h. For P. aeruginosa 12-09-15, the second and third doses of meropenem showed hardly any effect at all. P. aeruginosa PAO1 showed a reduction of –0.83
log10 CFU/ml after the second dose, but regrowth occurred as soon as that of P. aeruginosa 12-09-15 and was also not affected by the third dose. At 40 h after the first dose, the bacterial cell count was 20 times that of the inoculum for both strains. |
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TABLE 2. Phenotypic and genotypic characterization of parent and mutant strains selected during treatment with meropenem and ceftazidimea
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log10 CFU/ml was detected after the third dose, at 17.5 h. Up to that time, slow bacterial regrowth occurred. During the treatment with ceftazidime, the drug concentration did not fall below the MIC (2 mg/liter) for the bacterial test strain P. aeruginosa PAO1 for 24 h. At 40 h after the first application of the drug, the P. aeruginosa PAO1 cell count was 20 times that of the inoculum. Because of unfavorable pharmacodynamic parameters and pharmacokinetic-pharmacodynamic indices for ceftazidime and P. aeruginosa 12-09-15 (MIC, 16 mg/liter; T>MIC, 45.75%), no in vitro simulation with this combination was carried out. Selection of mutants. The selection of mutants during the in vitro model experiments is depicted in Fig. 1.
Mutants of P. aeruginosa PAO1 selected during treatment with meropenem.
After the first application of meropenem, no mutant selection was detectable, as the count of mutant cells was below the detection limit. During the administration of the second dose, detectable mutant selection took place, resulting in a mutant population that constituted 0.026
of the total after 16 h. Following the third application of meropenem, the proportion of mutants increased rapidly, and at the end of the in vitro model simulation, only mutants were found in the population.
Mutants of P. aeruginosa PAO1 selected during treatment with ceftazidime. Under the selective pressure of ceftazidime, mutant selection during the application of the second dose was also detected but to a 10,000-fold-greater extent than that during the application of the second dose of meropenem. After 16 h, at the beginning of the administration of the third dose, 33% of cells in the total population were mutant cells. Subsequently, the proportion of the detected mutants further increased, reaching 100% of the total population after 40 h.
Mutants of P. aeruginosa 12-09-15 selected during treatment with meropenem.
For P. aeruginosa 12-09-15, the selection of mutants started during the application of the first dose and yielded a mutant population of 0.811
of the total population after 8 h. The proportion of mutant cells further increased after the second application, to 16.7%. No further increase of the mutant cell numbers was observed from the administration of the last dose to the end of the in vitro model experiment at 40 h.
Characterization of hypermutability. The mutation frequency for rifampin resistance in P. aeruginosa 12-09-15 was 2.26 ± 0.23 mutants/106 cells. The presence of mutations responsible for the hypermutation phenotype of P. aeruginosa 12-09-15 was investigated by sequencing the mismatch repair system genes mutS, mutL, and uvrD. mutL had a 1-bp deletion (A1250) in codon 417 that resulted in a frameshift. No mutations in mutS and uvrD were detected.
Competitive growth assays with mutant and parent strains. The mutants selected during the in vitro simulations, P. aeruginosa PAO1/MEM, P. aeruginosa PAO1/CAZ, and P. aeruginosa 12-09-15/MEM, showed no disadvantage in fitness in the absence of selective pressure. As depicted in Fig. 2, no significant changes in the proportions of mutants in the total population were observed during the course of the competitive growth assays.
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FIG. 2. Results of the competitive growth assays with parent and mutant strains selected in in vitro model experiments with P. aeruginosa PAO1 and meropenem (PAO1_PAO1/MEM), P. aeruginosa PAO1 and ceftazidime ((PAO1_PAO1/CAZ), and P. aeruginosa 12-09-15 and meropenem (12-09-15_12-09-15/MEM). CFU counts indicating the total populations (A) and the proportion of the respective mutant (B) are shown.
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For P. aeruginosa PAO1/MEM, the meropenem MIC was three dilution steps higher than that for the parent strain (4 mg/liter versus 0.5 mg/liter), but this mutant was still susceptible according to CLSI breakpoints. The decrease in the susceptibility of the mutant to imipenem resulted in resistance (MIC for PAO1, 2 mg/liter; MIC for PAO1/MEM, 16 mg/liter).
Contrary to P. aeruginosa PAO1/MEM, P. aeruginosa 12-09-15/MEM did not retain the susceptibility of the parent strain to meropenem but exhibited resistance (MIC for PAO1, 2 mg/liter; MIC for 12-09-15/MEM, 16 mg/liter), while the MIC of imipenem for this mutant also increased to the level of resistance (from 4 to 16 mg/liter). For P. aeruginosa PAO1 and P. aeruginosa PAO1/MEM, no overproduction of efflux pumps was proven. For the mutator strain P. aeruginosa 12-09-15, the test for efflux pump overproduction was positive, with a 64-fold reduction of the MIC of levofloxacin in the presence of the efflux pump inhibitor Phe-Arg-ß-naphthylamide. The reduction of the MIC of levofloxacin for P. aeruginosa 12-09-15/MEM in the presence of the efflux pump inhibitor was equivalent to the reduction of the MIC for the parent strain (64-fold); therefore, no additional efflux pump overproduction occurred. The eight- and fourfold increases in the MICs of meropenem and imipenem, respectively, for PAO1/MEM and 12-09-15/MEM pointed to the loss of the porin OprD in both strains. For P. aeruginosa PAO1/MEM, sequencing revealed the loss of OprD due to a frameshift mutation in oprD. No mutation was detected in oprD of P. aeruginosa 12-09-15/MEM. However, an analysis of the outer membrane proteins of the parent strain, P. aeruginosa 12-09-15, and the mutant strain by sodium dodecyl sulfate-polyacrylamide gel electrophoresis clearly indicated that 12-09-15/MEM did not produce OprD or produced only very small amounts (data not shown).
For the test strain P. aeruginosa PAO1 and the mutant P. aeruginosa PAO1/CAZ used for and retrieved during the in vitro model experiment with ceftazidime, respectively, susceptibility to ceftazidime, piperacillin, and piperacillin-tazobactam; the overproduction of efflux pumps; the overproduction of the AmpC ß-lactamase; and mutations in ampD were investigated. The MIC of ceftazidime for the mutant P. aeruginosa PAO1/CAZ selected under simulated clinical ceftazidime profiles showed an increase from 2 to 32 mg/liter in comparison to the MIC for the parent strain, resulting in resistance. This change was in concordance with the result of the cephalosporinase inhibition test, which proved the overproduction of AmpC ß-lactamase by this mutant. Sequencing revealed no mutations in ampD of P. aeruginosa PAO1/CAZ, pointing to another underlying mechanism of AmpC overproduction. The efflux pump inhibition test revealed no selection of efflux pump overproduction during the treatment for P. aeruginosa PAO1/CAZ.
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Considering only pharmacodynamic parameters like AACs, the treatment of the wild-type P. aeruginosa strain PAO1 with ceftazidime seemed to yield a better outcome than treatment with meropenem (9.29
log10 CFU/ml·h instead of –22.46
log10 CFU/ml·h). However, the first dose of meropenem yielded a pronouncedly higher level of bactericidal efficacy (AAC from 0 to 8 h [AAC0-8], 5.3
log10 CFU/ml·h) than the first dose of ceftazidime (AAC0-8, –0.19
log10 CFU/ml·h). The MIC of meropenem for the hypermutable P. aeruginosa strain 12-09-15 was fourfold higher than that for the wild-type strain PAO1 (2 mg/liter versus 0.5 mg/liter). Of the pharmacokinetic/pharmacodynamic indices, the Cmax/MIC ratio has been postulated to be a good predictor of therapeutic efficacy (33) for antibiotics that show concentration-dependent killing. As ß-lactam antibiotics are supposed to kill in a time-dependent manner, the elevated meropenem MIC for P. aeruginosa strain 12-09-15 should not impair the antimicrobial effect. Accordingly, no significant difference in the outcome of meropenem treatment of the 12-09-15 and PAO1 strains was found (AACs, –19.58
log10 CFU/ml·h versus –22.46
log10 CFU/ml·h).
Besides the antibacterial effect on a bacterial strain, the extent of mutant selection plays an important role in ranking antimicrobial agents and dosing regimens. In a previous study, decreased susceptibility to meropenem and ceftazidime due to enrichment with resistant mutants during exposure to constant antimicrobial concentrations was detected only with hypermutable but not wild-type P. aeruginosa strains (30). In contrast, in our study mutants of P. aeruginosa PAO1 were detected after exposure to drugs used according to clinical pharmacokinetic profiles. This difference can be explained by the selective pressure associated with the simulated concentration-time curves for the antibiotics. Furthermore, we used a larger initial population (
3 x 109 cells versus 2 x 104 to 4 x 104 cells) that was sufficient to harbor already several mutants that further accumulated during treatment. This higher cell count was comparable to conditions in the clinical setting, as cell counts of 108 to 1010 CFU/ml of sputum from cystic fibrosis patients with chronic P. aeruginosa infections are found (13).
The ceftazidime-resistant one-step mutant P. aeruginosa PAO1/CAZ overproduced the AmpC ß-lactamase due to an undetermined mechanism. AmpC overproduction without ascertained mechanisms is also found in clinical isolates (4), and more studies are necessary to elucidate the regulatory network involving ampC expression in P. aeruginosa. For P. aeruginosa PAO1/CAZ, the specific mutant selection window (lower boundary, MIC for the parent strain; upper boundary, MIC for the specific mutant as a surrogate parameter representing the MPC) lasted 5.8 h during each dosing interval (Fig. 3). The concentration of ceftazidime was not below the MIC for the parent strain P. aeruginosa PAO1 at any point during the whole dosing regimen. The competitive growth assay revealed no disadvantage for strain PAO1/CAZ in the absence of selective pressure. Therefore, the one-step mutant that was selected during each of the three mutant selection windows had no disadvantage compared to its parent strain at any time but continuously replaced the wild-type cells in the population.
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FIG. 3. The concentration-time curve (concentrations were taken from references 17 and 20), the duration of the mutant selection window, and the amount of time that the drug concentration was below the MIC (T<MIC) for the parent strain in each dosing interval for PAO1 and meropenem (MEM) (A), PAO1 and ceftazidime (CAZ) (B), and 12-09-15 and meropenem (C) are shown.
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The treatment of P. aeruginosa 12-09-15 with meropenem enriched the population with the mutant P. aeruginosa 12-09-15/MEM only during three specific mutant selection windows lasting 2.3 h each. During each dosing interval, the concentration of meropenem was below the MIC for the parent strain approximately twice as long (4.7 h) as the duration of the mutant selection window, giving the parent strain the opportunity for successful growth. Its growth actually seemed to avoid further enrichment with the one-step mutants. According to Drlica (9), this finding contradicts the traditional teaching that mutant enrichment occurs at concentrations below the MIC. It is worth noting that, despite the hypermutator phenotype of P. aeruginosa 12-09-15, the selective pressure of meropenem enriched the cell population with a one-step mutant that acquired only one further mechanism of resistance to carbapenems, the deficiency in OprD. In contrast to PAO1/MEM, 12-09-15/MEM developed full meropenem resistance through the deficiency in OprD, as according to CLSI breakpoints, the clinically susceptible parent strain already showed decreased meropenem susceptibility due to upregulated efflux. The mutant did not further upregulate efflux pumps conferring additional cross-resistance, although meropenem is a substrate of several efflux systems. For the estimation of the expected number of mutants in a population, the accumulation of existing mutants and the production of new ones, which depends on the mutation rate, should be taken into account, as noted by Luria and Delbruck (21). Therefore, regarding the number of cells of the one-step mutant P. aeruginosa 12-09-15/MEM and the growth of this mutant during the simulated treatment, we cannot preclude that two-step mutants of the hypermutable parent strain were selected but might have remained undetected because of low cell counts. The in vivo emergence of a two-step mutant during ciprofloxacin treatment in a mouse model of lung infection with hypermutable P. aeruginosa was shown previously (24).
An optimal antibiotic dosing regimen shows a high level of antibacterial activity and low potential for stimulating resistance development. Our results indicate that the commonly used dosing regimens for meropenem and ceftazidime cannot avoid the selection of mutants of wild-type and hypermutable P. aeruginosa strains. Maintaining antibiotic concentrations above the MIC for the one-step mutant (time above the MPC) for a longer period than in present regimens might be beneficial. As hypermutability is very common in P. aeruginosa strains from cystic fibrosis patients and resistance is acquired predominantly through the accumulation of chromosomal mutations, the selection of mutants is especially disadvantageous for the repetitive treatment of these chronically infected patients.
B. Henrichfreise received a fellowship from the German national academic foundation (Studienstiftung des deutschen Volkes). Financial support was also obtained from AstraZeneca.
Published ahead of print on 6 August 2007. ![]()
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