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Antimicrobial Agents and Chemotherapy, February 2009, p. 435-441, Vol. 53, No. 2
0066-4804/09/$08.00+0 doi:10.1128/AAC.01099-08
Copyright © 2009, American Society for Microbiology. All Rights Reserved.

Laboratory of Microbiology, The Rockefeller University, New York, New York 10021
Received 15 August 2008/ Returned for modification 29 September 2008/ Accepted 6 November 2008
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The purpose of the studies described here was to construct a new experimental system that would allow one to further test the validity of the proposition that the resistance determinant of MRSA strains may have originated from the S. sciuri pbpD gene. The chromosomal resistance determinant SCCmec was excised from highly and homogeneously methicillin-resistant S. aureus strain COL to provide a methicillin-susceptible S. aureus (MSSA) strain, COL-S. In some of the new experiments, the essential S. aureus pbpB gene was also put under the control of an inducible promoter producing strain, COL-Sspac::pbpB. Both strains were then used as the recipient for plasmid-borne copies of the upregulated S. sciuri pbpD gene recovered from oxacillin-resistant clinical isolate SS37 of S. sciuri (3, 4). Transductants carrying the S. aureus mecA determinant on the same plasmid were used as controls. The physiological, genetic, and biochemical properties of the S. aureus COL-S transductants carrying the heterologous S. sciuri pbpD gene were then compared to the properties of original MRSA strain COL to determine to what extent the drug resistance-related phenotypes of the original MRSA strain were reconstructed in the transductants.
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TABLE 1. Bacterial strains and plasmidsa
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Peptidoglycan purification and analysis by HPLC. Peptidoglycan was purified from 1-liter cultures of bacteria grown at 30°C to mid-exponential phase, as described previously (5). Purified peptidoglycan was digested with mutanolysin (Sigma-Aldrich); and muropeptides were reduced with sodium borohydride (Sigma-Aldrich), separated by high-performance liquid chromatography (HPLC) on a C18 column (3 µm, 4.6 by 250 mm; ODS-Hypersil; Thermo Electron Corporation), and detected by measurement of the absorbance at 206 nm, as described previously (5).
Membrane purification and PBP assay. Membrane preparations were purified from cultures grown to the late exponential phase, as described previously (15). The detection of PBPs was performed by incubating the membrane preparations (150 µg of proteins) with a saturating concentration (20 µg/ml) of [14C]benzylpenicillin (59 mCi/mmol, 158 µCi/mg; GE Healthcare) at 30°C for 10 min. The reactions were stopped by adding an excess of unlabeled penicillin G. The proteins were separated by sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) in an 8% (wt/vol) acrylamide-0.06% (wt/vol) bisacrylamide gel. The labeled PBPs were detected with a tritium storage phosphor screen (GE Healthcare).
Detection of S. aureus PBP 2A and S. sciuri PBP 4 by Western blotting. Membrane preparations (80 µg of proteins) were separated by SDS-PAGE as described above. Transfer and blotting were done according to the instructions accompanying the ECL Western blotting analysis system (GE Healthcare). The ChromPure human immunoglobulin G Fc fragment (Jackson ImmunoResearch Laboratories) was used at 3 µg/ml to eliminate nonspecific hybridization with protein A. The primary antibody was a monoclonal antibody against S. aureus PBP 2A (dilution, 1:20,000) obtained by injecting a rabbit with the synthetic peptide sequence CDKNFKQVYKDSSYISKSDNG conjugated to keyhole limpet hemocyanin (a gift from JoAnn Hoskins, Eli Lilly, Indianapolis, IN), and the secondary antibody was the anti-rabbit antibody included in the kit (dilution, 1:5,000). S. sciuri PBP 4 has previously been shown to react also with the monoclonal antibody raised against S. aureus PBP 2A (4, 19).
RNA isolation and Northern blot analysis.
Total RNA was extracted from cultures grown up to an optical density at 620 nm (OD620) of 0.7. RNA (5 µg) was resolved by electrophoresis on 1.2% agarose-0.66 M formaldehyde gels in morpholinepropanesulfonic acid running buffer. RNA was blotted onto Hybond-N+ membranes (GE Healthcare) with a turbo blotter alkaline transfer system (Schleicher & Schuell) with 20x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate). The PCR-amplified DNA probes were labeled with [
-32P]dCTP (GE Healthcare) by using a Ready-To-Go labeling kit (GE Healthcare) and hybridized under high-stringency conditions. The blots were subsequently washed and autoradiographed.
Introduction of a plasmid-borne S. aureus COL mecA gene and S. sciuri SS37 pbpD gene into S. aureus strain COL-S and into a pbpB conditional mutant of COL-S.
Plasmid pPBP2i (13) was transduced into oxacillin-susceptible S. aureus strain COL-S (11) to produce strain COL-Sspac::pbpB, in which the expression of the chromosomal pbpB gene is under the control of the isopropyl-β-D-1-thiogalactopyranoside (IPTG)-inducible spac promoter. A PCR-amplified sequence of the 3,737-bp region of S. aureus COL mecA was ligated into shuttle plasmid pSPT181C to form pSTSW2C (19). A 4,130-bp fragment that included the promoter region of pbpD gene with a complete copy of IS256 inserted 109 bp upstream of the start codon and the entire pbpD gene was amplified from S. sciuri SS37 by PCR and was cloned into shuttle plasmid pSPT181C to form pSS37MA (20). Recombinant plasmids pSPSW2C and pSS37MA were subsequently introduced into S. aureus strain RN4220 by electroporation and were then transduced by phage 80
into S. aureus strain COL-S to yield the transductants COL-SSAmecA and COL-SSSpbpD, respectively, and into COL-Sspac::pbpB to yield the transductants COL-Sspac::pbpB/SAmecA and COL-Sspac::pbpB/SSpbpD, respectively.
Cloning of mecI and mecR1 regulatory genes and introduction into S. aureus. The 2,466-bp mecI-mecR1 region from S. aureus strain N315 was amplified with primers mecIP5 (5'-AGAGGGGATCCTCAACGACTTGATTGTTTCC-3') and mecRP9 (5'-GTTCGAATTCTTCTACTTCACCATTATCGC-3') and was ligated into the BamHI and EcoRI sites of high-copy-number plasmid pGC2 (D. C. Oliveira, unpublished data). The resulting recombinant plasmid, pGC2::mecI-mecR1, was electroporated into RN4220 and then transduced into COL, COL-SSAmecA, and COL-SSSpbpD to produce the transductants COLmecI-mecR1, COL-SSAmecA/mecI-mecR1, and COL-SSSpbpD/mecI-mecR1, respectively.
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TABLE 2. Susceptibility to β-lactam antibiotics
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Transcription and translation of plasmid-borne S. aureus mecA and S. sciuri pbpD in S. aureus. Figure 1 shows the results of Northern blot analysis, performed to estimate the degree of expression of S. aureus mecA and pbpB and S. sciuri pbpD in the different S. aureus backgrounds. No mecA transcript was detected in COL-S or its pbpB conditional mutant, COL-Sspac::pbpB. S. aureus mecA and S. sciuri pbpD were both effectively and highly expressed in transductants COL-Sspac::pbpB/SAmecA and COL-Sspac::pbpB/SSpbpD. The inhibition of pbpB transcription was confirmed in cultures of strains COL-Sspac::pbpB/SAmecA and COL-Sspac::pbpB/SSpbpD grown in the absence of the IPTG inducer.
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FIG. 1. Transcription of S. aureus mecA and pbpB genes and S. sciuri pbpD gene. RNA was purified from cultures grown at 30°C to an OD620 of 0.7. RNA (5 µg) was resolved by electrophoresis on agarose-formaldehyde gels. After transfer, the membranes were hybridized with 32P-labeled S. aureus mecA and pbpB and S. sciuri pbpD DNA probes.
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FIG. 2. PBP patterns and detection of protein products of S. aureus mecA (PBP 2A) and S. sciuri pbpD (PBP 4). (A) Membrane preparations (150 µg of proteins) were incubated with a single saturating concentration of [14C]benzylpenicillin. After SDS-PAGE, the gel was exposed to a tritium storage phosphor screen for 2 weeks. (B) Membrane preparations (80 µg of proteins) were tested by Western blot analysis for the production of proteins that react with a monoclonal antibody raised against S. aureus PBP 2A. The results for S. aureus COL and S. sciuri SS37 are provided as positive controls and size markers for PBP 2A and PBP 4, respectively. (C) Protein patterns on an SDS-polyacrylamide gel stained with Coomassie blue.
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Phenotypic expression of β-lactam resistance. Table 2 shows that the introduction of both the S. sciuri pbpD gene and the S. aureus mecA gene into MSSA strain COL-S was able to provide virtually identical levels of resistance to a group of β-lactam antibiotics which have considerably different degrees of selective binding to the four S. aureus PBPs. Transductants COL-SSSpbpD and COL-SSAmecA produced high-level and homogeneous resistance to ceftizoxime and cefotaxime (selective affinity for PBP 2), cephradine (PBP 3), cefoxitin (PBP 4), and oxacillin.
Inhibition of β-lactam resistance in transductants COL-SSSpbpD and COL-SSAmecA by subinhibitory concentrations of D-cycloserine and by the mecI-mecR1 regulatory genes. It has previously been shown that inhibitors of the early steps of cell wall synthesis can reduce the level of methicillin resistance and change the homogeneous resistance phenotype of strain COL to a heterogeneous one (16). Susceptibility to oxacillin in the presence of subinhibitory concentrations (0.25x MIC) of the cell wall synthesis inhibitor D-cycloserine was determined by population analysis. While the oxacillin MIC of strain COL-S remained unchanged, the resistance levels were drastically reduced in the presence of D-cycloserine, from MICs of 800 to 400 µg/ml for strains COL, COL-SSAmecA, and COL-SSSpbpD to MICs as low as 1, 8, and 0.75 µg/ml, respectively. In addition, the homogeneous expression of oxacillin resistance in COL-SSAmecA and COL-SSSpbpD was converted to heterogeneous expression (data not shown), as previously described for COL (16).
The S. aureus mecA gene has been shown to be transcriptionally regulated in some clinical isolates by mecR1 and mecI, cotranscribed chromosomal genes that encode a signal transducer and a repressor, respectively (9). The mecI-mecR1 region from S. aureus strain N315 was cloned in a high-copy-number plasmid and introduced into COL, COL-SSAmecA, and COL-SSSpbpD. The mecI and mecR1 regulatory genes repressed the phenotypic expression of β-lactam resistance in COL, as described previously (10), and well as in COL-SSAmecA (Table 2). Most interestingly, the level of β-lactam resistance was also extensively repressed in strain COL-SSSpbpD, which expressed the plasmid-borne S. sciuri pbpD gene (Table 2), suggesting that the MecI repressor can bind to the promoter region of S. sciuri pbpD similar to the way in which it binds to the promoter region of S. aureus mecA (14).
Replacement of the normal (essential) physiological function(s) of the S. aureus host PBP 2 by S. sciuri PBP 4. Previous studies have shown that S. aureus PBP 2, the protein product of the pbpB gene, is essential for growth in β-lactam-susceptible S. aureus strains. However, the additional PBP 2A present in MRSA strains can replace the essential function(s) of PBP 2 (7, 13). In order to test if S. sciuri PBP 4 was also able to support growth in PBP 2-deprived S. aureus cells, the plasmid-borne S. sciuri pbpD gene was introduced into S. aureus strain COL-Sspac::pbpB, in which the pbpB gene was put under the control of an IPTG-inducible promoter. As a control, the plasmid-borne S. aureus mecA gene was also introduced in the same background. As previously described for a β-lactam-susceptible S. aureus strain, the absence of IPTG prevented the growth of COL-Sspac::pbpB but only slowed the growth of the pbpB conditional mutant of MRSA strain COL, COLspac::pbpB (Fig. 3A). The introduction of the plasmid-borne S. sciuri pbpD gene into COL-Sspac::pbpB allowed the growth of strain COL-Sspac::pbpB/SSpbpD in the absence of IPTG, and the growth rate was comparable to that of COL-Sspac::pbpB/SAmecA carrying the plasmid-borne S. aureus mecA gene (Fig. 3B) indicating that, similarly to S. aureus PBP 2A, S. sciuri PBP 4 can replace the essential function(s) of the native PBP 2 of S. aureus.
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FIG. 3. Effect of suppression of pbpB transcription and introduction of the plasmid-borne S. aureus mecA or S. sciuri pbpD gene on growth in S. aureus. Overnight cultures supplemented with IPTG were centrifuged, washed twice, and suspended in fresh medium to an initial OD620 of 0.01 in the presence of 500 µM IPTG (closed symbols and solid lines) or in the absence of IPTG (open symbols and dashed lines). The turbidities of the cultures were monitored at 30°C for 12 h. (A) COL-Sspac::pbpB ( and ) and COLspac::pbpB ( and ); (B) COL-Sspac::pbpB/SAmecA ( and ) and COL-Sspac::pbpB/SSpbpD ( and ).
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FIG. 4. HPLC elution profiles of purified peptidoglycans. Peptidoglycans were purified from 1-liter cultures grown at 30°C to an OD620 of 0.4, digested with mutanolysin, and separated by HPLC. The peptidoglycan compositions of S. aureus COL (A), transductants COL-Sspac::pbpB/SAmecA (B) and COL-Sspac::pbpB/SSpbpD (C) grown in the absence of IPTG, and S. sciuri SS37 (D) were determined. Muropeptides were detected by measurement of the absorbance at 206 nm.
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FIG. 5. Effect of introduction of the plasmid-borne S. aureus mecA or S. sciuri pbpD genes and suppression of pbpB transcription on the expression of oxacillin resistance in S. aureus. Aliquots of overnight cultures were plated on tryptic soy agar containing increasing concentrations of oxacillin. The numbers of CFU were counted after incubation for 72 h at 30°C. The oxacillin susceptibility profiles were determined for COL ( ), COLspac::pbpB grown in the presence ( ) and absence ( ) of IPTG, COL-Sspac::pbpB grown in the presence of IPTG ( ), COL-Sspac::pbpB/SAmecA grown in the presence () and absence ( ) of IPTG, and COL-Sspac::pbpB/SSpbpD grown in the presence ( ) and absence ( ) of IPTG.
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In this report, a new experimental system was designed to further test the validity of the proposition that the mecA resistance determinant present in all MRSA strains may have originated from the S. sciuri pbpD gene. The resistance cassette SCCmec was excised from extensively studied MRSA strain COL to generate MSSA strain COL-S, which was subsequently used as the recipient of a plasmid-borne copy of an upregulated form of S. sciuri pbpD recovered from resistant S. sciuri clinical isolate SS37.
The transductants carrying the S. sciuri pbpD gene exhibited most, if not all, of the resistance-related properties of the original MRSA strain COL.
(i) S. aureus cells were able to transcribe and translate this foreign genetic determinant producing large amounts of S. sciuri PBP 4, which was deposited in the plasma membrane of the host bacterium. (ii) S. sciuri pbpD could function as an effective component of the antibiotic resistance mechanism in the heterologous background of S. aureus. The transductants had extremely high-level, homogeneous, and broad-spectrum resistance to structurally diverse β-lactam antibiotics, similar to the properties of MRSA strain COL. Also, similarly to strain COL, (iii) the oxacillin resistance level of the transductants was dependent on the function of the host S. aureus PBP 2 (7) and (iv) oxacillin resistance was repressed by inhibitors of an early step in cell wall biosynthesis (16) and by the specific regulatory genes mecI and mecR (10), suggesting that the MecI repressor can bind to the promoter region of the S. sciuri pbpD gene. (v) S. sciuri PBP 4 was able to fully replace the essential physiological function(s) of the native S. aureus PBP 2 in a conditional mutant in which transcription of pbpB gene was inhibited (7, 13). (vi) The composition of the cell wall peptidoglycan produced under these conditions was typical of that of the S. aureus peptidoglycan (5), indicating that S. sciuri PBP 4 can function as a cell wall synthetic enzyme in S. aureus and cooperate with the other PBPs and monofunctional transglycosylases of the host to build cell wall peptidoglycan.
Thus, by replacing the S. aureus chromosomal determinant of resistance to β-lactams with a plasmid-borne copy of the heterologous upregulated S. sciuri pbpD gene, we were able to reconstruct a typical MRSA strain which was phenotypically indistinguishable from original MRSA strain COL. These results provide further support for the proposition that the wide-spectrum β-lactam resistance determinant mecA carried by all MRSA strains has evolved from the S. sciuri pbpD gene.
Partial support for these investigations was provided by grant 2 RO1AI045738 from the U.S. Public Health Service.
Published ahead of print on 17 November 2008. ![]()
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