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Antimicrobial Agents and Chemotherapy, October 1998, p. 2534-2541, Vol. 42, No. 10
0066-4804/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.

Identification and Characterization of Novel Antimicrobial Decapeptides Generated by Combinatorial Chemistry

Sung Yu Hong,1 Jong Eun Oh,1 Mi yun Kwon,1 Myeong Jun Choi,1 Ji Hye Lee,2 Bok Luel Lee,2 Hong Mo Moon,1 and Keun Hyeung Lee1,*

Protein Chemistry Laboratory, Mogam Biotechnology Research Institute, Kyunggi-Do, 449-910,1 and College of Pharmacy, Pusan National University, Pusan 609-735,2 Korea

Received 28 January 1998/Returned for modification 8 June 1998/Accepted 15 July 1998

Novel combinatorial libraries consisting of simplified amino acid sequences were designed to screen for peptides active against the Candida albicans membrane. A novel decapeptide, KKVVFKVKFK, that had a unique primary amino acid sequence was identified in this work. This peptide irreversibly inhibited the growth of C. albicans and showed a broad range of antibacterial activity but no hemolytic activity. Circular dichroism spectra revealed that the predominant secondary structure of this peptide strongly depended on the membrane-mimetic environments; the peptide preferred to form an amphipathic alpha -helical structure in the presence of 50% trifluoroethanol, while it preferred to adopt a distorted alpha -helical structure in the presence of sodium dodecyl sulfate micelles. Experiments in which dye was released from vesicles indicated that this novel antimicrobial peptide killed microorganisms through the action on the membrane as its primary target. Replacement of amino acids in this active decapeptide on the basis of information from the libraries could provide unique information about factors affecting its antimicrobial activity such as its secondary structure, net positive charge, and hydrophobicity.


* Corresponding author. Mailing address: Protein Chemistry Laboratory, Mogam Biotechnology Research Institute, 341 Pojung-Ri, Koosung-Myun, Yongin City, Kyonggi-Do, 449-910, Korea. Phone: 82-331-262-3851. Fax: 82-331-262-6622. E-mail: lkh{at}kgcc.co.kr.


Antimicrobial Agents and Chemotherapy, October 1998, p. 2534-2541, Vol. 42, No. 10
0066-4804/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.



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