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Mechanisms of Resistance

Active-Site Protonation States in an Acyl-Enzyme Intermediate of a Class A β-Lactamase with a Monobactam Substrate

Venu Gopal Vandavasi, Patricia S. Langan, Kevin L. Weiss, Jerry M. Parks, Jonathan B. Cooper, Stephan L. Ginell, Leighton Coates
Venu Gopal Vandavasi
aBiology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
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Patricia S. Langan
aBiology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
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  • ORCID record for Patricia S. Langan
Kevin L. Weiss
aBiology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
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Jerry M. Parks
bBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
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Jonathan B. Cooper
cBirkbeck University of London, London, United Kingdom
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Stephan L. Ginell
dStructural Biology Center, Argonne National Laboratory, Argonne, Illinois, USA
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Leighton Coates
aBiology and Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
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DOI: 10.1128/AAC.01636-16
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ABSTRACT

The monobactam antibiotic aztreonam is used to treat cystic fibrosis patients with chronic pulmonary infections colonized by Pseudomonas aeruginosa strains expressing CTX-M extended-spectrum β-lactamases. The protonation states of active-site residues that are responsible for hydrolysis have been determined previously for the apo form of a CTX-M β-lactamase but not for a monobactam acyl-enzyme intermediate. Here we used neutron and high-resolution X-ray crystallography to probe the mechanism by which CTX-M extended-spectrum β-lactamases hydrolyze monobactam antibiotics. In these first reported structures of a class A β-lactamase in an acyl-enzyme complex with aztreonam, we directly observed most of the hydrogen atoms (as deuterium) within the active site. Although Lys 234 is fully protonated in the acyl intermediate, we found that Lys 73 is neutral. These findings are consistent with Lys 73 being able to serve as a general base during the acylation part of the catalytic mechanism, as previously proposed.

FOOTNOTES

    • Received 29 July 2016.
    • Returned for modification 30 August 2016.
    • Accepted 29 September 2016.
    • Accepted manuscript posted online 24 October 2016.
  • Supplemental material for this article may be found at https://doi.org/10.1128/AAC.01636-16 .

  • Copyright © 2016 Vandavasi et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license .

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Active-Site Protonation States in an Acyl-Enzyme Intermediate of a Class A β-Lactamase with a Monobactam Substrate
Venu Gopal Vandavasi, Patricia S. Langan, Kevin L. Weiss, Jerry M. Parks, Jonathan B. Cooper, Stephan L. Ginell, Leighton Coates
Antimicrobial Agents and Chemotherapy Dec 2016, 61 (1) e01636-16; DOI: 10.1128/AAC.01636-16

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Active-Site Protonation States in an Acyl-Enzyme Intermediate of a Class A β-Lactamase with a Monobactam Substrate
Venu Gopal Vandavasi, Patricia S. Langan, Kevin L. Weiss, Jerry M. Parks, Jonathan B. Cooper, Stephan L. Ginell, Leighton Coates
Antimicrobial Agents and Chemotherapy Dec 2016, 61 (1) e01636-16; DOI: 10.1128/AAC.01636-16
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KEYWORDS

Anti-Bacterial Agents
aztreonam
monobactams
beta-lactamases
β-lactamase
aztreonam
acyl-enzyme complex
neutron structure
X-ray structure

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