Table 2.

Oligonucleotides used in this study

PrimerSequence (5′-3′)aGeneReference
CTX-M-A1SCS ATG TCG AGY ACC AGT AAblaCTX-MThis study
CTX-M-A2CCG CRA TAT GRT TGG TGG TGblaCTX-M
SHV-AATG CGT TAT WTT CGC CTG TGTblaSHVThis study
SHV-BTTA GCG TTG CCA GTG CTC GblaSHV
PreTEM-1GTA TCC GCT CAT GAG ACA ATAblaTEMThis study
PreTEM-2TCT AAA GTA TAT ATG AGT AAA CTT GGT CTGblaTEM
NDM-FGGT TTG GCG ATC TGG TTT TCblaNDM23
NDM-RCGG AAT GGC TCA TCA CGA TCblaNDM
VIM 2004-AGTT TGG TCG CAT ATC GCA ACblaVIMThis study
VIM 2004-BAAT GCG CAG CAC CAG GAT AGblaVIM
QnrB-F-multi5′GGM ATH GAA ATT CGC CAC TGqnrB3
QnrB-R-multiTTT GCY GYY CGC CAG TCG AAqnrB
QnrA-F-multiAGA GGA TTT CTC ACG CCA GGqnrA3
QnrA-R-multiTGC CAG GCA CAG ATC TTG ACqnrA
QnrS-F-multiGCA AGT TCA TTG AAC AGG GTqnrS3
QnrS-R-multiTCT AAA CCG TCG AGT TCG GCGqnrS
QepA-FCTG CAG GTA CTG CGT CAT GqepAThis study
QepA-RCGT GTT GCT GGA GTT CTT CqepA
ISAba125ATGT ATA TTT CTG TGA CCC ACISAba125This study
ISAba125extACA CCA TTA GAG AAA TTT GCISAba125This study
bleo-RevGGC GAT GAC AGC ATC ATC CGbleMBLThis study
OXA-1ATCA ACT TTC AAG ATC GCAblaOXA-1This study
OXA-1BGTG TGT TTA GAA TGG TGAblaOXA-1
OXA-9ATTC GTT TCC GCC ACT CTC CCblaOXA-9This study
OXA-9BACG AGA ATA TCC TCT CGT GCblaOXA-9
OPR-1GTC TTT CGA GTA CGG CAT TAblaOXA-10This study
OPR-2ATT TTC TTA GCG GCA ACT TACblaOXA-10
OXA-48ATTG GTG GCA TCG ATT ATC GGblaOXA-48This study
OXA-48BGAG CAC TTC TTT TGT GAT GGCblaOXA-48
CMY-FATA ACC ACC AGT CAC GCblaCMYThis study
CMY-RCAG TAG CGA GAC TGC GCAblaCMY
AAC6′-Ib-cr1TTG CAA TGC TGA ATG GAG AGaac(6)-IbThis study
AAC6′-Ib-cr2CGT-TTG-GAT-CTT-GGT-GAC-CTaac(6)-Ib
ArmA-multiFATT TTA GAT TTT GGT TGT GGCarmA1
ArmA-multiRATC TCA GCT CTA TCA ATA TCGarmA
RmtB-multiFACT TTT ACA ATC CCT CAA TACrmtB1
RmtB-multiRAAG TAT ATA AGT TCT GTT CCGrmtB
NpmA-multiRGGG CTA TCT AAT GTG GTGnpmA1
NpmA-multiFTTT TTA TTT CCG CTT CTT CGTnpmA
RmtA-multiFAAA CTA TTC CGC ATG GTT CrmtA1
RmtA-multiRTCA TGT ACA CAA GCT CTT TCCrmtA
RmtC-multiFCAG GGG TTC CAA CAA GTrmtC1
RmtC-multiRAGA GTA TAT AGC TTG AAC ATA AGArmtC
RmtD-multiFGGA AAA GGA CGT GGA CArmtD1
RmtD-multiRTCC ATC GAT TCC ACA GGrmtD
  • a W is A or T; S is G or C; M is A or T; H is A, C, or T; Y is C or T; R is A or G.